Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	D	I	D	T	L	I	S	N	N	A	L	W	S	K	M	L	V	E	E	D	P	G	F	F	E	K	L	A	Q	A	Q	K	P	R	F	L	W	I	G	C	S	D	S	R	V	P	A	E	R	L	T	G	L	E	P	G	E	L
Secondary structure
SS confidence
Disorder		?	?														?	?	?	?	?	?	?							?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		F	V	H	R	N	V	A	N	L	V	I	H	T	D	L	N	C	L	S	V	V	Q	Y	A	V	D	V	L	E	V	E	H	I	I	I	C	G	H	Y	G	C	G	G	V	Q	A	A	V	E	N	P	E	L	G	L	I	N	N	W	L
Secondary structure
SS confidence
Disorder																																																				?	?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	H	I	R	D	I	W	F	K	H	S	S	L	L	G	E	M	P	Q	E	R	R	L	D	T	L	C	E	L	N	V	M	E	Q	V	Y	N	L	G	H	S	T	I	M	Q	S	A	W	K	R	G	Q	K	V	T	I	H	G	W	A
Secondary structure
SS confidence
Disorder															?	?	?	?	?																											?						?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Sequence		Y	G	I	H	D	G	L	L	R	D	L	D	V	T	A	T	N	R	E	T	L	E	Q	R	Y	R	H	G	I	S	N	L	K	L	K	H	A	N	H	K
Secondary structure
SS confidence
Disorder																	?	?	?	?															?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1i6p chain A Region: 2 - 215 Aligned: 214 Modelled: 214 Confidence: 100.0% Identity: 100% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 2a8c chain E Region: 1 - 214 Aligned: 214 Modelled: 214 Confidence: 100.0% Identity: 63% PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase Phyre2 PDB 1ddz chain A domain 1 Region: 1 - 205 Aligned: 205 Modelled: 205 Confidence: 100.0% Identity: 48% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1ddz chain A domain 2 Region: 2 - 201 Aligned: 200 Modelled: 200 Confidence: 100.0% Identity: 45% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 1ddz chain A Region: 1 - 218 Aligned: 218 Modelled: 218 Confidence: 100.0% Identity: 47% PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 Phyre2 PDB 3uco chain B Region: 2 - 206 Aligned: 205 Modelled: 205 Confidence: 100.0% Identity: 39% PDB header:lyase/lyase inhibitor Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide Phyre2 PDB 2w3n chain A Region: 1 - 198 Aligned: 198 Modelled: 198 Confidence: 100.0% Identity: 33% PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans Phyre2 PDB 1ekj chain A Region: 2 - 202 Aligned: 200 Modelled: 201 Confidence: 100.0% Identity: 25% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 3eyx chain B Region: 3 - 196 Aligned: 185 Modelled: 194 Confidence: 100.0% Identity: 30% PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae Phyre2 PDB 2a5v chain B Region: 2 - 200 Aligned: 191 Modelled: 199 Confidence: 100.0% Identity: 28% PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form Phyre2 PDB 3las chain A Region: 1 - 192 Aligned: 164 Modelled: 179 Confidence: 100.0% Identity: 23% PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution Phyre2 PDB 1ylk chain A Region: 2 - 191 Aligned: 160 Modelled: 187 Confidence: 100.0% Identity: 18% PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate Phyre2 PDB 1g5c chain A Region: 4 - 195 Aligned: 166 Modelled: 192 Confidence: 100.0% Identity: 24% Fold: Resolvase-like Superfamily: beta-carbonic anhydrase, cab Family: beta-carbonic anhydrase, cab Phyre2 PDB 2hwk chain A Region: 159 - 218 Aligned: 43 Modelled: 60 Confidence: 62.6% Identity: 26% PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Phyre2 PDB 1j2r chain A Region: 53 - 115 Aligned: 57 Modelled: 63 Confidence: 36.5% Identity: 19% Fold: Isochorismatase-like hydrolases Superfamily: Isochorismatase-like hydrolases Family: Isochorismatase-like hydrolases Phyre2 PDB 3deg chain C Region: 89 - 102 Aligned: 14 Modelled: 14 Confidence: 30.9% Identity: 21% PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp Phyre2 PDB 2h5e chain B Region: 89 - 102 Aligned: 14 Modelled: 14 Confidence: 28.9% Identity: 21% PDB header:translation Chain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3 Phyre2 PDB 3i8s chain C Region: 92 - 102 Aligned: 11 Modelled: 11 Confidence: 28.7% Identity: 27% PDB header:transport protein Chain: C: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of the cytosolic domain of e. coli feob, nucleotide-free2 form Phyre2 PDB 1n0u chain A domain 2 Region: 89 - 102 Aligned: 14 Modelled: 14 Confidence: 28.6% Identity: 21% Fold: P-loop containing nucleoside triphosphate hydrolases Superfamily: P-loop containing nucleoside triphosphate hydrolases Family: G proteins Phyre2 PDB 1fqt chain A Region: 177 - 190 Aligned: 14 Modelled: 14 Confidence: 28.2% Identity: 14% Fold: ISP domain Superfamily: ISP domain Family: Rieske iron-sulfur protein (ISP) Phyre2 1 d1i6pa_ 2 c2a8cE_ 3 d1ddza1 4 d1ddza2 5 c1ddzA_ 6 c3ucoB_ 7 c2w3nA_ 8 d1ekja_ 9 c3eyxB_ 10 c2a5vB_ 11 c3lasA_ 12 c1ylkA_ 13 d1g5ca_ 14 c2hwkA_ 15 d1j2ra_ 16 c3degC_ 17 c2h5eB_ 18 c3i8sC_ 19 d1n0ua2 20 d1fqta_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1i6pa_ 100.0 100 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 2 c2a8cE_ 100.0 63 PDB header:lyase Chain: E: PDB Molecule:carbonic anhydrase 2; PDBTitle: haemophilus influenzae beta-carbonic anhydrase 3 d1ddza1 100.0 48 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 4 d1ddza2 100.0 45 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 5 c1ddzA_ 100.0 47 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase; PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1 6 c3ucoB_ 100.0 39 PDB header:lyase/lyase inhibitor Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: coccomyxa beta-carbonic anhydrase in complex with iodide 7 c2w3nA_ 100.0 33 PDB header:lyase Chain: A: PDB Molecule:carbonic anhydrase 2; PDBTitle: structure and inhibition of the co2-sensing carbonic2 anhydrase can2 from the pathogenic fungus cryptococcus3 neoformans 8 d1ekja_ 100.0 25 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 9 c3eyxB_ 100.0 30 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 10 c2a5vB_ 100.0 28 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase (carbonate dehydratase) (carbonic PDBTitle: crystal structure of m. tuberculosis beta carbonic anhydrase, rv3588c,2 tetrameric form 11 c3lasA_ 100.0 23 PDB header:lyase Chain: A: PDB Molecule:putative carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution 12 c1ylkA_ 100.0 18 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322; PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate 13 d1g5ca_ 100.0 24 Fold:Resolvase-like Superfamily:beta-carbonic anhydrase, cab Family:beta-carbonic anhydrase, cab 14 c2hwkA_ 62.6 26 PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain 15 d1j2ra_ 36.5 19 Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases 16 c3degC_ 30.9 21 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 17 c2h5eB_ 28.9 21 PDB header:translation Chain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3 18 c3i8sC_ 28.7 27 PDB header:transport protein Chain: C: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of the cytosolic domain of e. coli feob, nucleotide-free2 form 19 d1n0ua2 28.6 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 20 d1fqta_ 28.2 14 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 21 c2de7E_ not modelled 28.0 31 PDB header:oxidoreductase Chain: E: PDB Molecule:ferredoxin component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase 22 d1zo0a1 not modelled 27.4 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:Ornithine decarboxylase antizyme-like 23 c3d89A_ not modelled 27.3 17 PDB header:electron transport Chain: A: PDB Molecule:rieske domain-containing protein; PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus 24 d1nrjb_ not modelled 26.8 42 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 25 d1z01a1 not modelled 26.0 29 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 26 d2de6a1 not modelled 25.7 50 Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain 27 c2ywfA_ not modelled 25.2 29 PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus 28 d2fh5b1 not modelled 24.6 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 29 c3trkA_ not modelled 24.5 16 PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease 30 c3ibyA_ not modelled 24.5 33 PDB header:transport protein Chain: A: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of cytosolic domain of l. pneumophila feob 31 c3gceA_ not modelled 24.3 14 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a- PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177 32 d1rkba_ not modelled 24.2 27 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 33 c1d2eA_ not modelled 24.2 27 PDB header:rna binding protein Chain: A: PDB Molecule:elongation factor tu (ef-tu); PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp 34 c2qu8A_ not modelled 23.9 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nucleolar gtp-binding protein 1; PDBTitle: crystal structure of putative nucleolar gtp-binding protein 1 pff0625w2 from plasmodium falciparum 35 d2jo6a1 not modelled 23.2 25 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 36 c3p27A_ not modelled 22.9 27 PDB header:signaling protein Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: crystal structure of a translational gtpase (gdp form) 37 c3k53B_ not modelled 22.5 15 PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b; PDBTitle: crystal structure of nfeob from p. furiosus 38 c1mj1A_ not modelled 22.4 27 PDB header:ribosome Chain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome 39 d1s0ua3 not modelled 22.3 36 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 40 c3izyP_ not modelled 21.8 29 PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 41 c3tr5C_ not modelled 21.3 21 PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii 42 c2bvnB_ not modelled 21.1 27 PDB header:elongation factor Chain: B: PDB Molecule:elongation factor tu; PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic2 enacyloxin iia 43 d1r5ba3 not modelled 21.1 36 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 44 c2dy1A_ not modelled 21.0 29 PDB header:signaling protein, translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of ef-g-2 from thermus thermophilus 45 c1zunB_ not modelled 20.7 27 PDB header:transferase Chain: B: PDB Molecule:sulfate adenylate transferase, subunit PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae 46 d1efca3 not modelled 20.1 27 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 47 c2qagC_ not modelled 20.0 27 PDB header:cell cycle, structural protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of human septin trimer 2/6/7 48 c3oqpB_ not modelled 19.9 11 PDB header:hydrolase Chain: B: PDB Molecule:putative isochorismatase; PDBTitle: crystal structure of a putative isochorismatase (bxe_a0706) from2 burkholderia xenovorans lb400 at 1.22 a resolution 49 d1g7sa4 not modelled 19.9 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 50 c2rauA_ not modelled 19.3 18 PDB header:hydrolase Chain: A: PDB Molecule:putative esterase; PDBTitle: crystal structure of a putative lipase (np_343859.1) from sulfolobus2 solfataricus at 1.85 a resolution 51 c1r5nA_ not modelled 19.3 36 PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp 52 c2zxrA_ not modelled 19.1 24 PDB header:hydrolase Chain: A: PDB Molecule:single-stranded dna specific exonuclease recj; PDBTitle: crystal structure of recj in complex with mg2+ from thermus2 thermophilus hb8 53 c3hb7G_ not modelled 19.1 14 PDB header:hydrolase Chain: G: PDB Molecule:isochorismatase hydrolase; PDBTitle: the crystal structure of an isochorismatase-like hydrolase from2 alkaliphilus metalliredigens to 2.3a 54 d1ulra_ not modelled 19.0 14 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 55 c3t5dC_ not modelled 18.9 27 PDB header:signaling protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp 56 c2qpzA_ not modelled 18.8 15 PDB header:metal binding protein Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin 57 d1svia_ not modelled 18.4 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 58 c2xexA_ not modelled 18.4 29 PDB header:translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g 59 d2ih2a2 not modelled 18.2 24 Fold:DNA methylase specificity domain Superfamily:DNA methylase specificity domain Family:TaqI C-terminal domain-like 60 c3br8A_ not modelled 17.6 14 PDB header:hydrolase Chain: A: PDB Molecule:probable acylphosphatase; PDBTitle: crystal structure of acylphosphatase from bacillus subtilis 61 c3pqcA_ not modelled 17.6 14 PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp 62 c2i7fB_ not modelled 17.5 36 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin component of dioxygenase; PDBTitle: sphingomonas yanoikuyae b1 ferredoxin 63 c1s0uA_ not modelled 17.3 36 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo 64 d3c0da1 not modelled 17.1 9 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 65 c3a1vB_ not modelled 17.0 18 PDB header:transport protein Chain: B: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form 66 c1z01D_ not modelled 17.0 27 PDB header:oxidoreductase Chain: D: PDB Molecule:2-oxo-1,2-dihydroquinoline 8-monooxygenase, PDBTitle: 2-oxoquinoline 8-monooxygenase component: active site2 modulation by rieske-[2fe-2s] center oxidation/reduction 67 d1egaa1 not modelled 16.9 40 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 68 d1vm9a_ not modelled 16.8 27 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 69 c2wjjB_ not modelled 16.5 27 PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b homolog; PDBTitle: structure and function of the feob g-domain from2 methanococcus jannaschii 70 d2bv3a2 not modelled 16.5 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 71 c1zo1I_ not modelled 16.3 29 PDB header:translation/rna Chain: I: PDB Molecule:translation initiation factor 2; PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex 72 d2jzaa1 not modelled 16.2 18 Fold:ISP domain Superfamily:ISP domain Family:NirD-like 73 c1g7cA_ not modelled 16.1 27 PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp 74 c3oqpA_ not modelled 16.0 11 PDB header:hydrolase Chain: A: PDB Molecule:putative isochorismatase; PDBTitle: crystal structure of a putative isochorismatase (bxe_a0706) from2 burkholderia xenovorans lb400 at 1.22 a resolution 75 d1udxa2 not modelled 15.9 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 76 c2plfA_ not modelled 15.6 36 PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form. 77 c2x2fD_ not modelled 15.6 27 PDB header:hydrolase Chain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form 78 c2zovA_ not modelled 15.4 33 PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i) 79 d1apsa_ not modelled 14.8 21 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 80 d1w2ia_ not modelled 14.7 24 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:Acylphosphatase-like 81 d1viaa_ not modelled 14.6 33 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Shikimate kinase (AroK) 82 c2r8bA_ not modelled 14.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2452; PDBTitle: the crystal structure of the protein atu2452 of unknown function from2 agrobacterium tumefaciens str. c58 83 c1kk3A_ not modelled 14.4 36 PDB header:translation Chain: A: PDB Molecule:eif2gamma; PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+ 84 c1wb1C_ not modelled 14.4 36 PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp 85 d1wf3a1 not modelled 14.1 25 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 86 c3lxwA_ not modelled 13.5 33 PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 87 d2gc6a1 not modelled 13.3 16 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:Folylpolyglutamate synthetase, C-terminal domain 88 c3a1wA_ not modelled 13.2 14 PDB header:transport protein Chain: A: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the g domain of t. maritima feob iron2 iransporter 89 c3lx8A_ not modelled 13.0 30 PDB header:metal transport Chain: A: PDB Molecule:ferrous iron uptake transporter protein b; PDBTitle: crystal structure of gdp-bound nfeob from s. thermophilus 90 c2elfA_ not modelled 13.0 27 PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei 91 c4proD_ not modelled 12.9 10 PDB header:serine protease Chain: D: PDB Molecule:alpha-lytic protease; PDBTitle: alpha-lytic protease complexed with pro region 92 c3o93A_ not modelled 12.8 16 PDB header:hydrolase Chain: A: PDB Molecule:nicotinamidase; PDBTitle: high resolution crystal structures of streptococcus pneumoniae2 nicotinamidase with trapped intermediates provide insights into3 catalytic mechanism and inhibition by aldehydes 93 c3dukD_ not modelled 12.7 10 PDB header:unknown function Chain: D: PDB Molecule:ntf2-like protein of unknown function; PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution 94 c3hynA_ not modelled 12.6 20 PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (eubrec_0645) from eubacterium rectale atcc 33656 at 1.20 a3 resolution 95 c3gkqB_ not modelled 12.6 47 PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a- PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 novosphingobium sp. ka1 96 c1qgeD_ not modelled 12.6 18 PDB header:hydrolase Chain: D: PDB Molecule:protein (triacylglycerol hydrolase); PDBTitle: new crystal form of pseudomonas glumae (formerly chromobacterium2 viscosum atcc 6918) lipase 97 c2wsmB_ not modelled 12.5 29 PDB header:metal binding protein Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb); PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus 98 d2hh8a1 not modelled 12.5 13 Fold:YdfO-like Superfamily:YdfO-like Family:YdfO-like 99 c3snhA_ not modelled 12.5 27 PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0