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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1wb1C_

Fold library idPDB HeaderMoleculeTitle
c1wb1C_PDB header: protein synthesisChain: C: PDB Molecule: translation elongation factor selb;PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp


Added to library: Tue Mar 16 12:29:05 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGRPHMDFKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVD
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Known secondary structure (DSSP)

S




B





TTSSTTTTTSS
SS
SSSSTTTTS




SS

TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence APGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNAGTEEIKRTEMI
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Known secondary structure (DSSP)
SSSS
SS




TTT


TT





TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLNNAEIIRNTESYFKMPLDHAFPIKGAGTVVTG
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Known secondary structure (DSSP) SSGGGG


TTTTTTTTS





SS


TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TINKGIVKVGDELKVLPINMSTKVRSIQYFKESVMEAKAGDRVGMAIQGVDAKQIYRGILTSKDTKLQTV
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Known secondary structure (DSSP)


BS
SS
TTTT
SSSS
SS


SS
GGG





TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence DKIVAKIKISDIFKYNLTPKMKVHLNVGMLIVPAVAVPFKKVTFGKTEENIILNEVISGNEYAFELEEKV
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Known secondary structure (DSSP)

B
TT

SB

SS


TT







SS



S

BSSB


 .........360.........370.........380.........390.........400.........410.........420
Sequence LAEVGDRVLITRLDLPPTTLRIGHGLIEEFKPIKDLNIKKEVLREGKVKIDKGRTVIDGLAQSKVAAEKL
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Known secondary structure (DSSP)

TT





SS
SSS







TGGG

B

B



SSS

BBSSS
TTTS
 .........430.........440.........450.........460.........
Sequence IGEEISIEGKDIVGKIKGTFGTKGLLTAEFSGNVENRDKVILNRLRRWG
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Known secondary structure (DSSP)
S

BSSTT




TTT
BSS


SS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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