Fold library entry viewer: c3snhA_

Added to library: Sat Sep 24 10:16:14 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	D	L	I	P	L	V	N	R	L	Q	D	A	F	S	A	I	G	Q	N	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	G	T	R	R	P	L	V	L	Q	L	V	N	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T														T	T	T			S	S	S											T	T												T	S			S		S	S					S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	P	D	I	E	F	Q	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T	T	T		S			B																	T						S										S	S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	M	D	E	G	T	D	A	R	D	V	L	E	N	K	L	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T									T	T	S		S	T	T												S	S	S	S	S								S	T	T	S		T	T								T	T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	R	G	Y	I	G	V	V	N	R	S	Q	K	D	I	D	G	K	K	D	I	T	A	A	L	A	A	E	R	K	F	F	L	S	H	P	S	Y	R	H	L	A	D	R	M	G	T	P	Y	L	Q	K	V	L	N	Q	Q	L	T	N	H	I	R	D	T	L	P	G	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													S	S	S	S																T						T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	K	L	Q	S	Q	L	L	S	I	E	K	E	V	E	E	Y	K	N	F	R	P	D	D	P	A	R	K	T	K	A	L	L	Q	M	V	Q	Q	F	A	V	D	F	E	K	R	I	E	G	S	G	G	A	R	I	N	R	I	F	H	E	R	F	P	F	E	L	V	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S	S	S	S	S														T	T																																	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	F	D	E	K	E	L	R	R	E	I	S	Y	A	I	K	P	D	M	A	F	E	T	I	V	K	K	Q	V	K	K	I	R	E	P	C	L	K	C	V	D	M	V	I	S	E	L	I	S	T	V	R	Q	C	T	K	K	Q	Y	P	R	L	R	E	E	M	E	R	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																												G	G	G	G																	T	T	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	T	H	I	R	E	R	E	G	R	T	K	E	Q	V	M	L	L	I	D	I	E	L	A	Y	M	N	T	N	H	E	D	F	I	G	F	A	N	A	I	L	V	I	R	K	G	W	L	T	I	N	N	I	G	I	S	K	E	Y	W	F	V	L	T	A	E	N	L	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T				S	S	S	S	S			T	T	S													B															S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	K	D	D	E	E	K	E	K	E	Y	M	L	S	V	D	N	L	K	L	R	D	V	E	K	S	K	H	I	F	A	L	F	N	T	E	Q	R	N	V	Y	K	D	Y	R	Q	L	E	L	A	C	E	T	Q	E	E	V	D	S	W	K	A	S	F	L	R	A	G	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T			S							S	T	T																		S	S	S	S		S	B	T	T	B	S	S						S	S													T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	E	R	V	G	P	Q	L	E	R	Q	V	E	T	I	R	N	L	V	D	S	Y	M	A	I	V	N	K	T	V	R	D	L	M	P	K	T	I	M	H	L	M	I	N	N	T	K	E	F	I	F	S	E	L	L	A	N	L	Y	S	C	E	E	S	A	E	Q	A	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																																								T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Sequence	R	D	E	M	L	R	M	Y	H	A	L	K	E	A	L	S	I	I	G	D	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S

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PDB structure

FASTA sequence

Hidden Markov model

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