Email l.a.kelley@imperial.ac.uk Description P77423 Date Thu Jan 5 12:29:03 GMT 2012 Unique Job ID ccc383750c56c574

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2fug91 99.9 38 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 2 c2fugG_ 99.9 38 PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 3 d1xera_ 99.6 27 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Archaeal ferredoxins 4 c1gthD_ 99.6 21 PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil 5 d1gtea5 99.6 20 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 6 c2gmhA_ 99.6 20 PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone 7 c3gyxJ_ 99.5 28 PDB header:oxidoreductase Chain: J: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas 8 d2fug34 99.5 16 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 9 d1jb0c_ 99.5 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 10 c1kqfB_ 99.5 32 PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli 11 c1hfeL_ 99.5 18 PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans 12 d2gmha3 99.5 18 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:ETF-QO domain-like 13 c2c3yA_ 99.5 30 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus 14 d1hfel2 99.5 25 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 15 d7fd1a_ 99.5 27 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 16 d2c42a5 99.5 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 17 d1h98a_ 99.4 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 18 d1jnrb_ 99.4 25 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 19 d1bc6a_ 99.4 34 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 20 d1rgva_ 99.4 24 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 21 d1kqfb1 not modelled 99.4 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 22 c2zvsB_ not modelled 99.4 22 PDB header:electron transport Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli 23 d2fdna_ not modelled 99.4 40 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 24 c2vpyB_ not modelled 99.4 23 PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) 25 d1dura_ not modelled 99.4 36 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 26 d3c8ya3 not modelled 99.4 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 27 d1blua_ not modelled 99.4 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 28 c1gx7A_ not modelled 99.4 27 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase 29 c1ti2F_ not modelled 99.4 14 PDB header:oxidoreductase Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici 30 d1vjwa_ not modelled 99.4 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 31 c1c4cA_ 99.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 32 d1fcaa_ not modelled 99.3 36 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 33 d1h0hb_ not modelled 99.3 25 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 34 c2fgoA_ not modelled 99.3 26 PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa 35 d1vlfn2 not modelled 99.3 15 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 36 c2fugC_ not modelled 99.3 14 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 37 d1y5ib1 not modelled 99.3 24 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 38 d1clfa_ not modelled 99.3 36 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 39 c2ivfB_ not modelled 99.3 28 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 40 d1iqza_ not modelled 99.3 23 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 41 d1sj1a_ not modelled 99.2 21 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 42 c2v2kB_ not modelled 99.2 25 PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis 43 c3c7bE_ not modelled 99.1 26 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 44 d1fxra_ not modelled 99.1 16 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 45 c1dwlA_ not modelled 99.1 19 PDB header:electron transfer Chain: A: PDB Molecule:ferredoxin i; PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation 46 c2v4jE_ not modelled 99.1 26 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 47 d3c7bb1 not modelled 99.0 28 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 48 c3c7bA_ not modelled 98.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 49 c2v4jA_ not modelled 98.7 13 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 50 c3bk7A_ not modelled 98.3 29 PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii 51 d2bs2b1 not modelled 98.1 15 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 52 c2b76N_ not modelled 98.0 26 PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation 53 c2bs2E_ not modelled 98.0 24 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 54 c1nekB_ not modelled 98.0 23 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound 55 d1kf6b1 not modelled 97.9 36 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 56 c2h89B_ not modelled 97.9 25 PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound 57 d1nekb1 not modelled 97.8 23 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 58 d2v4jb1 not modelled 97.5 33 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 59 c3cf4A_ not modelled 97.4 34 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 60 d3c7ba1 not modelled 91.7 19 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 61 d2v4ja1 not modelled 91.2 18 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 62 d1fxda_ not modelled 84.4 20 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 63 c2vdcI_ not modelled 78.4 35 PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. 64 d1xpaa2 not modelled 67.3 25 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain 65 c2drpD_ not modelled 41.9 19 PDB header:transcription/dna Chain: D: PDB Molecule:protein (tramtrack dna-binding domain); PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition 66 c1meyG_ not modelled 39.0 14 PDB header:transferase/dna Chain: G: PDB Molecule:consensus zinc finger; PDBTitle: crystal structure of a designed zinc finger protein bound2 to dna 67 d2cota1 not modelled 36.6 15 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 68 d1x6ea2 not modelled 36.2 15 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 69 d1llmc2 not modelled 35.1 24 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 70 c2k5cA_ not modelled 34.4 21 PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein pf0385; PDBTitle: nmr structure for pf0385 71 c2xigA_ not modelled 34.2 15 PDB header:transcription Chain: A: PDB Molecule:ferric uptake regulation protein; PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites 72 d2cota2 not modelled 33.8 11 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 73 d1x6ha2 not modelled 31.3 19 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 74 c1g8jC_ not modelled 31.2 13 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis 75 d2ct1a2 not modelled 31.2 19 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 76 d1u85a1 not modelled 31.1 24 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 77 c2eoqA_ not modelled 27.9 12 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the c2h2 type zinc finger (region 283-2 315) of human zinc finger protein 224 78 c2ytmA_ not modelled 27.8 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 696-2 728) of human zinc finger protein 28 homolog 79 d1x6ea1 not modelled 27.1 12 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 80 c2ytbA_ not modelled 26.7 15 PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of c2h2 type zinc finger domain 5 in2 zinc finger protein 32 81 c2elsA_ not modelled 26.5 13 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 2nd c2h2 zinc finger of human2 zinc finger protein 406 82 c2yu5A_ not modelled 26.3 24 PDB header:rna binding protein Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the zf-c2h2 domain (669-699aa) in2 zinc finger protein 473 83 c3tsuA_ not modelled 26.0 24 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 84 c2eltA_ not modelled 25.5 13 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 3rd c2h2 zinc finger of human2 zinc finger protein 406 85 d1a1ia3 not modelled 25.3 24 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 86 d2epsa1 not modelled 24.8 13 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 87 d1xf7a_ not modelled 24.7 20 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 88 c1xf7A_ not modelled 24.7 20 PDB header:transcription Chain: A: PDB Molecule:wilms' tumor protein; PDBTitle: high resolution nmr structure of the wilms' tumor2 suppressor protein (wt1) finger 3 89 c2eq4A_ not modelled 24.5 15 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the 11th c2h2 type zinc finger domain2 of zinc finger protein 224 90 d1p7aa_ not modelled 24.4 29 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 91 c2emwA_ not modelled 24.4 12 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the c2h2 type zinc finger (region 301-2 331) of human zinc finger protein 268 92 d1srka_ not modelled 24.1 19 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 93 d1a1ia2 not modelled 23.4 19 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 94 c2ythA_ not modelled 23.4 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the c2h2 type zinc finger (region 479-2 511) of human zinc finger protein 224 95 c2emlA_ not modelled 22.8 15 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 752-2 784) of human zinc finger protein 28 homolog 96 c1va3A_ not modelled 22.8 15 PDB header:transcription Chain: A: PDB Molecule:transcription factor sp1; PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 3) 97 c2ytaA_ not modelled 22.5 19 PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of c2h2 type zinc finger domain 3 in2 zinc finger protein 32 98 c2yttA_ not modelled 22.5 19 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 204-2 236) of human zinc finger protein 473 99 c3mwmA_ not modelled 22.4 15 PDB header:transcription Chain: A: PDB Molecule:putative metal uptake regulation protein; PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur 100 c2en6A_ not modelled 22.3 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the c2h2 type zinc finger (region 887-2 919) of human zinc finger protein 268 101 c2elqA_ not modelled 22.2 16 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 14th c2h2 zinc finger of human2 zinc finger protein 406 102 d1sp1a_ not modelled 22.2 15 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 103 c1sp1A_ not modelled 22.2 15 PDB header:zinc finger Chain: A: PDB Molecule:sp1f3; PDBTitle: nmr structure of a zinc finger domain from transcription2 factor sp1f3, minimized average structure 104 d1gtea1 not modelled 22.2 35 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Dihydropyrimidine dehydrogenase, N-terminal domain 105 c2kvfA_ not modelled 22.1 21 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein 106 c1areA_ not modelled 22.0 30 PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding 107 c2eovA_ not modelled 21.9 15 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 484; PDBTitle: solution structure of the c2h2 type zinc finger (region 519-2 551) of human zinc finger protein 484 108 c2em4A_ not modelled 21.6 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 724-2 756) of human zinc finger protein 28 homolog 109 d1ubdc2 not modelled 21.4 19 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 110 c2epzA_ not modelled 21.0 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the 4th c2h2 type zinc finger domain2 of zinc finger protein 28 homolog 111 c2ytjA_ not modelled 21.0 11 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 484; PDBTitle: solution structure of the c2h2 type zinc finger (region 771-2 803) of human zinc finger protein 484 112 c2yteA_ not modelled 20.9 14 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 484-2 512) of human zinc finger protein 473 113 c2en2A_ not modelled 20.8 12 PDB header:transcription Chain: A: PDB Molecule:b-cell lymphoma 6 protein; PDBTitle: solution structure of the c2h2 type zinc finger (region 598-2 626) of human b-cell lymphoma 6 protein