Email l.a.kelley@imperial.ac.uk Description P36672 Date Thu Jan 5 11:53:37 GMT 2012 Unique Job ID c979efe6b9315f86

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qnqD_ 100.0 12 PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system 2 c3ipjB_ 99.9 27 PDB header:transferase Chain: B: PDB Molecule:pts system, iiabc component; PDBTitle: the crystal structure of one domain of the pts system, iiabc component2 from clostridium difficile 3 c1ibaA_ 99.8 22 PDB header:phoshphotransferase Chain: A: PDB Molecule:glucose permease; PDBTitle: glucose permease (domain iib), nmr, 11 structures 4 d3bp8c1 99.8 21 Fold:Homing endonuclease-like Superfamily:Glucose permease domain IIB Family:Glucose permease domain IIB 5 c2voyB_ 48.2 18 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 6 c3sy6A_ 44.2 21 PDB header:cell adhesion Chain: A: PDB Molecule:fimbrial protein bf1861; PDBTitle: crystal structure of a fimbrial protein bf1861 [bacteroides fragilis2 nctc 9343] (bf1861) from bacteroides fragilis nctc 9343 at 1.90 a3 resolution 7 c3t2lA_ 39.2 16 PDB header:cell adhesion Chain: A: PDB Molecule:putative cell adhesion protein; PDBTitle: crystal structure of a putative cell adhesion protein (bf1858) from2 bacteroides fragilis nctc 9343 at 2.33 a resolution 8 c2janD_ 29.3 24 PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state 9 c2kncB_ 25.7 14 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 10 c2kncA_ 25.4 6 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 11 d1ffgb_ 23.5 10 Fold:Ferredoxin-like Superfamily:CheY-binding domain of CheA Family:CheY-binding domain of CheA 12 c1a0oH_ 22.6 10 PDB header:chemotaxis Chain: H: PDB Molecule:chea; PDBTitle: chey-binding domain of chea in complex with chey 13 c2pmuD_ 19.4 15 PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop 14 c2hqnA_ 18.8 12 PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism 15 c1m6yA_ 17.3 11 PDB header:transferase Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah 16 d1pu6a_ 17.0 4 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:3-Methyladenine DNA glycosylase III (MagIII) 17 d2bgwa1 16.8 23 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 18 d1vgga_ 16.4 22 Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like 19 d1kgsa1 16.2 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 20 d1vr6a1 15.2 13 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 21 d1ciya1 not modelled 15.2 26 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 22 d2cyya2 not modelled 15.0 11 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 23 d1gxqa_ not modelled 14.9 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 24 d2gola1 not modelled 14.6 8 Fold:Retroviral matrix proteins Superfamily:Retroviral matrix proteins Family:Immunodeficiency virus matrix proteins 25 c3zqsB_ not modelled 14.6 11 PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase fancl; PDBTitle: human fancl central domain 26 c1oy8A_ not modelled 14.6 17 PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump 27 c2wshC_ not modelled 14.5 10 PDB header:hydrolase Chain: C: PDB Molecule:endonuclease ii; PDBTitle: structure of bacteriophage t4 endoii e118a mutant 28 d1ji6a1 not modelled 12.9 26 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 29 c3k8hA_ not modelled 12.5 25 PDB header:membrane protein Chain: A: PDB Molecule:30klp; PDBTitle: structure of crystal form i of tp0453 30 d2cfua2 not modelled 12.3 21 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Alkylsulfatase-like 31 c1vbkA_ not modelled 11.8 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 32 c3ufiA_ not modelled 10.9 17 PDB header:cell adhesion Chain: A: PDB Molecule:hypothetical protein bacova_04980; PDBTitle: crystal structure of a hypothetical protein2 bacova_04980(zp_02067969.1) from bacteroides ovatus atcc 8483 at 2.183 a resolution 33 c2cfuA_ not modelled 10.8 21 PDB header:hydrolase Chain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid. 34 d1qu3a1 not modelled 10.7 10 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 35 d2a5la1 not modelled 10.2 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 36 d1wlqc_ not modelled 10.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DNA replication factor Cdt1 37 d1mwza_ not modelled 10.1 12 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 38 c3ibwA_ not modelled 10.0 8 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 39 c2jnhA_ not modelled 10.0 7 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of the uba domain from cbl-b 40 c2ekmC_ not modelled 9.8 30 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii 41 d2r7da2 not modelled 9.8 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RNB domain-like 42 c2gl0A_ not modelled 9.6 33 PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine 43 d1fzda_ not modelled 9.6 22 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 44 d1l6na1 not modelled 9.4 8 Fold:Retroviral matrix proteins Superfamily:Retroviral matrix proteins Family:Immunodeficiency virus matrix proteins 45 c2j61B_ not modelled 9.0 26 PDB header:lectin Chain: B: PDB Molecule:ficolin-2; PDBTitle: l-ficolin complexed to n-acetylglucosamine (forme c) 46 d1i1ga2 not modelled 8.4 10 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 47 d2prra1 not modelled 8.3 24 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 48 c2jzyA_ not modelled 8.2 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae 49 c2bbjB_ not modelled 8.2 13 PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter 50 d1tama_ not modelled 8.1 8 Fold:Retroviral matrix proteins Superfamily:Retroviral matrix proteins Family:Immunodeficiency virus matrix proteins 51 c2k5eA_ not modelled 8.1 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of putative uncharacterized protein2 gsu1278 from methanocaldococcus jannaschii, northeast3 structural genomics consortium (nesg) target gsr195 52 d1od5a2 not modelled 7.9 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 53 d1lwub1 not modelled 7.7 13 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 54 d1hiwa_ not modelled 7.7 4 Fold:Retroviral matrix proteins Superfamily:Retroviral matrix proteins Family:Immunodeficiency virus matrix proteins 55 c2xv4S_ not modelled 7.6 15 PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) 56 c2do6A_ not modelled 7.6 7 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 57 d1m1jc1 not modelled 7.3 26 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 58 d1ffya1 not modelled 7.3 12 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 59 d1rrqa1 not modelled 7.3 11 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Mismatch glycosylase 60 c2aj1A_ not modelled 7.3 13 PDB header:hydrolase Chain: A: PDB Molecule:probable cadmium-transporting atpase; PDBTitle: solution structure of apocada 61 d1x0pa1 not modelled 7.2 24 Fold:Ferredoxin-like Superfamily:Acylphosphatase/BLUF domain-like Family:BLUF domain 62 d2a1jb1 not modelled 7.2 27 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 63 d1ngka_ not modelled 7.2 15 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 64 c2d9sA_ not modelled 7.2 7 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 65 d1j9ia_ not modelled 7.1 8 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Terminase gpNU1 subunit domain 66 d1x2ia1 not modelled 7.0 26 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 67 d1orna_ not modelled 7.0 17 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Endonuclease III 68 d1j4na_ not modelled 7.0 14 Fold:Aquaporin-like Superfamily:Aquaporin-like Family:Aquaporin-like 69 d1dlca1 not modelled 7.0 39 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:delta-Endotoxin, C-terminal domain 70 c2kscA_ not modelled 6.9 25 PDB header:unknown function Chain: A: PDB Molecule:cyanoglobin; PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin 71 c1dlcA_ not modelled 6.9 32 PDB header:toxin Chain: A: PDB Molecule:delta-endotoxin cryiiia; PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution 72 d1fida_ not modelled 6.9 30 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 73 c2e1cA_ not modelled 6.9 10 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 74 c1p68A_ not modelled 6.7 29 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed protein s-824; PDBTitle: solution structure of s-824, a de novo designed four helix2 bundle 75 d1fftb2 not modelled 6.6 12 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 76 c2zbcH_ not modelled 6.6 13 PDB header:transcription Chain: H: PDB Molecule:83aa long hypothetical transcriptional regulator asnc; PDBTitle: crystal structure of sts042, a stand-alone ram module protein, from2 hyperthermophilic archaeon sulfolobus tokodaii strain7. 77 c2r7fA_ not modelled 6.6 14 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease ii family protein; PDBTitle: crystal structure of ribonuclease ii family protein from deinococcus2 radiodurans, hexagonal crystal form. northeast structural genomics3 target drr63 78 d1m1ha2 not modelled 6.5 13 Fold:Ferredoxin-like Superfamily:N-utilization substance G protein NusG, N-terminal domain Family:N-utilization substance G protein NusG, N-terminal domain 79 c3aq8A_ not modelled 6.5 17 PDB header:oxygen binding Chain: A: PDB Molecule:group 1 truncated hemoglobin; PDBTitle: crystal structure of truncated hemoglobin from tetrahymena pyriformis,2 q46e mutant, fe(iii) form 80 c2djwF_ not modelled 6.4 25 PDB header:unknown function Chain: F: PDB Molecule:probable transcriptional regulator, asnc family; PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8 81 c3pcoD_ not modelled 6.4 15 PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp 82 c2w1oA_ not modelled 6.4 25 PDB header:translation Chain: A: PDB Molecule:60s acidic ribosomal protein p2; PDBTitle: nmr structure of dimerization domain of human ribosomal2 protein p2 83 c2jsxA_ not modelled 6.4 8 PDB header:chaperone Chain: A: PDB Molecule:protein napd; PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd 84 d1s69a_ not modelled 6.3 25 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 85 d2csba3 not modelled 6.2 17 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Topoisomerase V repeat domain 86 d1ilea1 not modelled 6.2 15 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 87 c2hfnJ_ not modelled 6.2 24 PDB header:electron transport Chain: J: PDB Molecule:synechocystis photoreceptor (slr1694); PDBTitle: crystal structures of the synechocystis photoreceptor slr1694 reveal2 distinct structural states related to signaling 88 d2vv5a3 not modelled 6.2 10 Fold:Mechanosensitive channel protein MscS (YggB), transmembrane region Superfamily:Mechanosensitive channel protein MscS (YggB), transmembrane region Family:Mechanosensitive channel protein MscS (YggB), transmembrane region 89 c3bvhC_ not modelled 6.1 30 PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen gamma chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide 90 d1jida_ not modelled 6.1 40 Fold:SRP19 Superfamily:SRP19 Family:SRP19 91 d1vpba_ not modelled 6.0 13 Fold:Putative modulator of DNA gyrase, PmbA/TldD Superfamily:Putative modulator of DNA gyrase, PmbA/TldD Family:Putative modulator of DNA gyrase, PmbA/TldD 92 d1rzsa_ not modelled 6.0 18 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 93 c1jb7A_ not modelled 6.0 14 PDB header:dna-binding protein/dna Chain: A: PDB Molecule:telomere-binding protein alpha subunit; PDBTitle: dna g-quartets in a 1.86 a resolution structure of an oxytricha nova2 telomeric protein-dna complex 94 c1ph4A_ not modelled 6.0 14 PDB header:dna binding protein/dna Chain: A: PDB Molecule:telomere-binding protein alpha subunit; PDBTitle: crystal structure of the oxytricha nova telomere end-binding protein2 complexed with noncognate ssdna ggggttttggcg 95 d1f7ua3 not modelled 6.0 12 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Family:Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain 96 c2jvaA_ not modelled 6.0 23 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase domain protein; PDBTitle: nmr solution structure of peptidyl-trna hydrolase domain protein from2 pseudomonas syringae pv. tomato. northeast structural genomics3 consortium target psr211 97 d2cfxa2 not modelled 6.0 25 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 98 d1re3b1 not modelled 5.9 17 Fold:Fibrinogen C-terminal domain-like Superfamily:Fibrinogen C-terminal domain-like Family:Fibrinogen C-terminal domain-like 99 c2kddB_ not modelled 5.8 31 PDB header:cell cycle Chain: B: PDB Molecule:borealin; PDBTitle: solution structure of the conserved c-terminal dimerization2 domain of borealin