Fold library entry viewer: d1vpba_

Added to library: Tue Mar 16 14:24:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	T	D	E	N	K	K	L	A	Q	W	A	M	D	Y	A	L	K	N	G	C	Q	A	A	K	V	L	L	Y	S	S	S	N	T	S	F	E	L	R	D	M	D	R	L	Q	Q	A	S	E	G	G	L	S	L	S	L	Y	V	D	G	R	Y	G	S	I	S	T	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T		S																																					T	T								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	R	K	E	L	E	T	F	I	K	N	G	I	D	S	T	R	Y	L	A	K	D	E	A	R	V	L	A	D	P	S	R	Y	Y	K	G	G	K	P	D	L	K	L	Y	D	A	K	F	A	S	L	N	P	D	D	K	I	E	M	A	K	A	V	A	E	E	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S				T	T						G	G	G	B			S								S		T	T	G	G	G																T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	D	E	R	I	I	S	V	G	S	S	Y	G	D	G	E	D	F	A	Y	R	L	I	S	N	G	F	E	G	E	T	K	S	T	W	Y	S	L	S	A	D	I	T	I	R	G	E	G	E	A	R	P	S	A	Y	W	Y	E	S	S	L	Y	M	N	D	L	I	K	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T																				T	T	T																					S	T	T												S	S	G	G	G	S			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	G	Q	K	A	L	E	R	V	L	R	K	L	G	Q	K	K	V	Q	S	G	K	Y	T	M	V	V	D	P	M	N	S	S	R	L	L	S	P	M	I	S	A	L	N	G	S	A	L	Q	Q	K	N	S	F	L	L	N	K	L	N	E	K	I	A	S	D	R	L	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T	T		B													T	T	T											T	T	B						T	T			T	T	T	T		T	T	S	B		S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	D	E	P	H	L	V	K	A	S	G	A	R	Y	F	D	N	E	G	I	A	T	E	R	R	S	I	F	D	K	G	V	L	N	T	Y	F	I	D	T	Y	N	A	K	K	M	G	V	D	P	T	I	S	G	S	S	I	L	V	M	E	T	G	D	K	N	L	D	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		T	T		T	T			S	B		T	T		B	B									T	T						B										T	S					S	S		S								S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	A	G	V	E	K	G	I	L	V	T	G	F	N	G	G	N	N	N	S	S	T	G	D	F	S	Y	G	I	E	G	F	L	I	E	N	G	K	L	T	Q	P	V	S	E	M	N	V	T	G	N	L	I	T	L	W	N	S	L	V	A	T	G	N	D	P	R	L	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		S															T	T	T														T	T																					T						S				T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Sequence	S	W	R	I	P	S	L	V	F	E	G	V	D	F	S	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S

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PDB structure

FASTA sequence

Hidden Markov model

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