Emaill.a.kelley@imperial.ac.uk
DescriptionP05704
DateThu Jan 5 10:58:48 GMT 2012
Unique Job IDc7abcd33ff569cea

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1qu7A_



99.7 69 PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
2c2ch7A_



99.3 29 PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
3c3g67A_



98.9 23 PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
4c2wpqA_



95.5 6 PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
5c2d4uA_



95.2 13 PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: crystal structure of the ligand binding domain of the bacterial serine2 chemoreceptor tsr
6c3lnrA_



92.6 9 PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
7c1sj8A_



90.1 9 PDB header:structural protein
Chain: A: PDB Molecule:talin 1;
PDBTitle: crystal structure of talin residues 482-789
8d2asxa1



86.0 25 Fold:HAMP domain-like
Superfamily:HAMP domain-like
Family:HAMP domain
9d2liga_



84.0 13 Fold:Four-helical up-and-down bundle
Superfamily:Aspartate receptor, ligand-binding domain
Family:Aspartate receptor, ligand-binding domain
10c2kbbA_



80.1 13 PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the talin rod domain, 1655-1822
11c2rm8A_



79.9 21 PDB header:signaling protein
Chain: A: PDB Molecule:sensory rhodopsin ii transducer;
PDBTitle: the solution structure of phototactic transducer protein2 htrii linker region from natronomonas pharaonis
12c1ei3E_



77.2 6 PDB header:
PDB COMPND:
13c2qihA_



70.5 13 PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis
14c1ei3C_



70.0 6 PDB header:
PDB COMPND:
15c3ojaB_



66.1 9 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
16c1deqO_



59.2 11 PDB header:
PDB COMPND:
17c3b5nF_



53.9 14 PDB header:membrane protein
Chain: F: PDB Molecule:protein sso1;
PDBTitle: structure of the yeast plasma membrane snare complex
18c1urqA_



52.5 25 PDB header:transport protein
Chain: A: PDB Molecule:m-tomosyn isoform;
PDBTitle: crystal structure of neuronal q-snares in complex with2 r-snare motif of tomosyn
19c3ipdB_



51.3 9 PDB header:exocytosis
Chain: B: PDB Molecule:syntaxin-1a;
PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
20c2ieqC_



49.5 11 PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
21c1deqF_



not modelled 47.8 7 PDB header:
PDB COMPND:
22c3hd7A_



not modelled 43.1 20 PDB header:exocytosis
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
23c1sfcJ_



not modelled 42.9 10 PDB header:transport protein
Chain: J: PDB Molecule:protein (syntaxin 1a);
PDBTitle: neuronal synaptic fusion complex
24c2kseA_



not modelled 39.8 16 PDB header:transferase
Chain: A: PDB Molecule:sensor protein qsec;
PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor qsec, center for structures of3 membrane proteins (csmp) target 4311c
25c1n7sB_



not modelled 39.7 11 PDB header:transport protein
Chain: B: PDB Molecule:syntaxin 1a;
PDBTitle: high resolution structure of a truncated neuronal snare2 complex
26c1n7sA_



not modelled 34.7 20 PDB header:transport protein
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: high resolution structure of a truncated neuronal snare2 complex
27c1sfcI_



not modelled 34.3 20 PDB header:transport protein
Chain: I: PDB Molecule:protein (synaptobrevin 2);
PDBTitle: neuronal synaptic fusion complex
28c1gl2A_



not modelled 34.2 11 PDB header:membrane protein
Chain: A: PDB Molecule:endobrevin;
PDBTitle: crystal structure of an endosomal snare core complex
29c2vs0B_



not modelled 33.8 13 PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
30c2npsB_



not modelled 33.6 10 PDB header:transport protein
Chain: B: PDB Molecule:syntaxin 13;
PDBTitle: crystal structure of the early endosomal snare complex
31c2npsA_



not modelled 31.6 23 PDB header:transport protein
Chain: A: PDB Molecule:vesicle-associated membrane protein 4;
PDBTitle: crystal structure of the early endosomal snare complex
32c3b5nE_



not modelled 28.2 20 PDB header:membrane protein
Chain: E: PDB Molecule:synaptobrevin homolog 1;
PDBTitle: structure of the yeast plasma membrane snare complex
33c3gvmA_



not modelled 27.9 10 PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
34c1nafA_



not modelled 27.6 15 PDB header:signaling protein, membrane protein
Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1;
PDBTitle: crystal structure of the human gga1 gat domain
35c3ok8A_



not modelled 21.4 9 PDB header:protein binding
Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein
PDBTitle: i-bar of pinkbar
36d1eq1a_



not modelled 17.6 12 Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
37c1zvaA_



not modelled 16.7 16 PDB header:viral protein
Chain: A: PDB Molecule:e2 glycoprotein;
PDBTitle: a structure-based mechanism of sars virus membrane fusion
38d1oxza_



not modelled 15.9 14 Fold:Spectrin repeat-like
Superfamily:GAT-like domain
Family:GAT domain
39c1oxzA_



not modelled 15.9 14 PDB header:membrane protein
Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1;
PDBTitle: crystal structure of the human gga1 gat domain
40c2bezC_



not modelled 15.2 9 PDB header:viral protein
Chain: C: PDB Molecule:e2 glycoprotein;
PDBTitle: structure of a proteolitically resistant core from the2 severe acute respiratory syndrome coronavirus s2 fusion3 protein
41d2qamn1



not modelled 15.0 20 Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
42d2zjrk1



not modelled 14.9 20 Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
43d2b0ha1



not modelled 14.8 10 Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:VBS domain
44c2efrB_



not modelled 14.7 8 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
45c1sfcD_



not modelled 14.3 8 PDB header:transport protein
Chain: D: PDB Molecule:protein (snap-25b);
PDBTitle: neuronal synaptic fusion complex
46c1l4aD_



not modelled 13.6 7 PDB header:endocytosis/exocytosis
Chain: D: PDB Molecule:s-snap25 fusion protein;
PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
47c3bboP_



not modelled 13.4 33 PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein l17;
PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
48c1kmiZ_



not modelled 13.4 9 PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
49c2d3eD_



not modelled 13.3 11 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
50d1ez3a_



not modelled 13.2 11 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
51d1wr6a1



not modelled 13.1 8 Fold:Spectrin repeat-like
Superfamily:GAT-like domain
Family:GAT domain
52c3ghgK_



not modelled 12.7 6 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
53c1m1jA_



not modelled 12.3 11 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
54d2asra_



not modelled 12.2 15 Fold:Four-helical up-and-down bundle
Superfamily:Aspartate receptor, ligand-binding domain
Family:Aspartate receptor, ligand-binding domain
55c2jp3A_



not modelled 12.1 20 PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
56c2npsD_



not modelled 11.6 11 PDB header:transport protein
Chain: D: PDB Molecule:syntaxin-6;
PDBTitle: crystal structure of the early endosomal snare complex
57c1wyyB_



not modelled 11.4 9 PDB header:viral protein
Chain: B: PDB Molecule:e2 glycoprotein;
PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
58d1rkea1



not modelled 11.4 14 Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
59c2d4yA_



not modelled 11.1 10 PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
60c2jo1A_



not modelled 10.7 16 PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
61c2kvpA_



not modelled 10.6 9 PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the talin vbs3 domain, 1815-1973
62c2l10A_



not modelled 10.6 10 PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: structure of the talin rod residues, domain c
63c3zrwB_



not modelled 10.5 9 PDB header:signaling protein
Chain: B: PDB Molecule:af1503 protein, osmolarity sensor protein envz;
PDBTitle: the structure of the dimeric hamp-dhp fusion a291v mutant
64c2l7nA_



not modelled 10.4 15 PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the b domain of talin
65c1bf5A_



not modelled 10.4 7 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
66c2fxmB_



not modelled 10.4 6 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
67c3c98B_



not modelled 9.9 10 PDB header:endocytosis/exocytosis
Chain: B: PDB Molecule:syntaxin-1a;
PDBTitle: revised structure of the munc18a-syntaxin1 complex
68c3arcl_



not modelled 9.7 30 PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
69c2l9uA_



not modelled 9.7 13 PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3;
PDBTitle: spatial structure of dimeric erbb3 transmembrane domain
70c1zv8I_



not modelled 9.7 7 PDB header:viral protein
Chain: I: PDB Molecule:e2 glycoprotein;
PDBTitle: a structure-based mechanism of sars virus membrane fusion
71c3bz2L_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer
72c2axtl_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
73c1s5lL_



not modelled 9.6 30 PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
74d2axtl1



not modelled 9.6 30 Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein L, PsbL
Family:PsbL-like
75c3bz1L_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer
76c3a0bL_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of br-substituted photosystem ii complex
77c3a0bl_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of br-substituted photosystem ii complex
78c3kziL_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
79c3prrL_



not modelled 9.6 30 PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
80c3prqL_



not modelled 9.6 30 PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
81c1s5ll_



not modelled 9.6 30 PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
82c3arcL_



not modelled 9.6 30 PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
83c2axtL_



not modelled 9.6 30 PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
84c1wdfA_



not modelled 9.3 9 PDB header:viral protein
Chain: A: PDB Molecule:e2 glycoprotein;
PDBTitle: crystal structure of mhv spike protein fusion core
85c3gxvD_



not modelled 9.3 6 PDB header:hydrolase/replication
Chain: D: PDB Molecule:replicative dna helicase;
PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
86d1s94a_



not modelled 9.3 14 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
87c1s94A_



not modelled 9.3 14 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:s-syntaxin;
PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei
88c2zxeG_



not modelled 9.2 15 PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:phospholemman-like protein;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
89d1o3xa_



not modelled 9.1 16 Fold:Spectrin repeat-like
Superfamily:GAT-like domain
Family:GAT domain
90d1x79a_



not modelled 9.0 14 Fold:Spectrin repeat-like
Superfamily:GAT-like domain
Family:GAT domain
91d1g40a1



not modelled 9.0 25 Fold:Complement control module/SCR domain
Superfamily:Complement control module/SCR domain
Family:Complement control module/SCR domain
92c3s90A_



not modelled 9.0 20 PDB header:cell adhesion
Chain: A: PDB Molecule:vinculin;
PDBTitle: human vinculin head domain vh1 (residues 1-252) in complex with murine2 talin (vbs33; residues 1512-1546)
93c2kpeB_



not modelled 8.9 11 PDB header:membrane protein
Chain: B: PDB Molecule:glycophorin-a;
PDBTitle: refined structure of glycophorin a transmembrane segment dimer in dpc2 micelles
94c2kpeA_



not modelled 8.9 11 PDB header:membrane protein
Chain: A: PDB Molecule:glycophorin-a;
PDBTitle: refined structure of glycophorin a transmembrane segment dimer in dpc2 micelles
95c2xzrA_



not modelled 8.8 16 PDB header:cell adhesion
Chain: A: PDB Molecule:immunoglobulin-binding protein eibd;
PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors
96c3gxvC_



not modelled 8.8 6 PDB header:hydrolase/replication
Chain: C: PDB Molecule:replicative dna helicase;
PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
97c3m9bK_



not modelled 8.6 14 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
98c2l16A_



not modelled 8.5 10 PDB header:protein transport
Chain: A: PDB Molecule:sec-independent protein translocase protein tatad;
PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles
99c1i49A_



not modelled 8.5 8 PDB header:signaling protein
Chain: A: PDB Molecule:arfaptin 2;
PDBTitle: crystal structure analysis of arfaptin