Email l.a.kelley@imperial.ac.uk Description P75933 Date Thu Jan 5 12:16:07 GMT 2012 Unique Job ID c48ab13d62389012

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3frnA_ 100.0 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:flagellar protein flga; PDBTitle: crystal structure of flagellar protein flga from thermotoga maritima2 msb8 2 d2zdra1 97.9 21 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 3 d1vlia1 97.8 15 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 4 c3g8rA_ 97.6 22 PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 5 c1xuzA_ 97.6 21 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 6 c1vliA_ 97.3 17 PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution 7 d1opsa_ 97.2 19 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 8 d1c8aa2 97.0 23 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 9 c1wvoA_ 96.7 30 PDB header:transferase Chain: A: PDB Molecule:sialic acid synthase; PDBTitle: solution structure of rsgi ruh-029, an antifreeze protein2 like domain in human n-acetylneuraminic acid phosphate3 synthase gene. 10 d3nlaa_ 96.6 19 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 11 c1c8aA_ 96.3 23 PDB header:antifreeze protein Chain: A: PDB Molecule:protein (antifreeze protein type iii); PDBTitle: nmr structure of intramolecular dimer antifreeze protein2 rd3, 40 sa structures 12 d1ucsa_ 86.7 19 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 13 d1hg7a_ 86.3 19 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 14 c3k3sG_ 48.4 19 PDB header:hydrolase Chain: G: PDB Molecule:altronate hydrolase; PDBTitle: crystal structure of altronate hydrolase (fragment 1-84) from shigella2 flexneri. 15 c1iq8B_ 44.7 19 PDB header:transferase Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii 16 d1yloa1 43.8 19 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 17 d1sv6a_ 40.1 18 Fold:FAH Superfamily:FAH Family:FAH 18 c2eb5D_ 36.4 14 PDB header:lyase Chain: D: PDB Molecule:2-oxo-hept-3-ene-1,7-dioate hydratase; PDBTitle: crystal structure of hpcg complexed with oxalate 19 d2q07a1 34.7 12 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 20 c4a1cS_ 33.4 19 PDB header:ribosome Chain: S: PDB Molecule:rpl26; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. 21 c3l53F_ not modelled 32.2 16 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative fumarylacetoacetate isomerase/hydrolase; PDBTitle: crystal structure of a putative fumarylacetoacetate2 isomerase/hydrolase from oleispira antarctica 22 d2zjrr1 not modelled 31.3 23 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 23 d1vqot1 not modelled 30.1 23 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 24 c3iz5Y_ not modelled 29.5 19 PDB header:ribosome Chain: Y: PDB Molecule:60s ribosomal protein l26 (l24p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 25 c3f9xA_ not modelled 26.9 33 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd8; PDBTitle: structural insights into lysine multiple methylation by set2 domain methyltransferases, set8-y334f / h4-lys20me2 /3 adohcy 26 d2g46a1 not modelled 21.8 27 Fold:beta-clip Superfamily:SET domain Family:Viral histone H3 Lysine 27 Methyltransferase 27 d2f69a2 not modelled 21.1 7 Fold:beta-clip Superfamily:SET domain Family:Histone lysine methyltransferases 28 c2w5zA_ not modelled 20.7 33 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase hrx; PDBTitle: ternary complex of the mixed lineage leukaemia (mll1) set2 domain with the cofactor product s-adenosylhomocysteine3 and histone peptide. 29 d1nr9a_ not modelled 20.0 13 Fold:FAH Superfamily:FAH Family:FAH 30 c3opeA_ not modelled 19.0 20 PDB header:transferase Chain: A: PDB Molecule:probable histone-lysine n-methyltransferase ash1l; PDBTitle: structural basis of auto-inhibitory mechanism of histone2 methyltransferase 31 c3n71A_ not modelled 18.7 13 PDB header:transcription Chain: A: PDB Molecule:histone lysine methyltransferase smyd1; PDBTitle: crystal structure of cardiac specific histone methyltransferase smyd1 32 d2grea1 not modelled 18.6 18 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 33 d1vhea1 not modelled 18.5 20 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 34 d1h3ia2 not modelled 17.8 7 Fold:beta-clip Superfamily:SET domain Family:Histone lysine methyltransferases 35 d1pgsa1 not modelled 16.7 23 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:PHM/PNGase F Family:Glycosyl-asparaginase 36 c3cw1D_ not modelled 16.2 18 PDB header:splicing Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp 37 c3bw1A_ not modelled 16.1 9 PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm3; PDBTitle: crystal structure of homomeric yeast lsm3 exhibiting novel octameric2 ring organisation 38 c3h6lA_ not modelled 15.9 13 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd2; PDBTitle: methyltransferase domain of human set domain-containing protein 2 39 c3ooiA_ not modelled 15.6 27 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-36 and h4 PDBTitle: crystal structure of human histone-lysine n-methyltransferase nsd1 set2 domain in complex with s-adenosyl-l-methionine 40 c1xqhE_ not modelled 13.8 7 PDB header:transferase Chain: E: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-4 PDBTitle: crystal structure of a ternary complex of the2 methyltransferase set9 (also known as set7/9) with a p533 peptide and sah 41 d1ml9a_ not modelled 13.7 27 Fold:beta-clip Superfamily:SET domain Family:Histone lysine methyltransferases 42 c3s8pA_ not modelled 13.3 27 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv420h1; PDBTitle: crystal structure of the set domain of human histone-lysine n-2 methyltransferase suv420h1 in complex with s-adenosyl-l-methionine 43 d1u6ea2 not modelled 13.3 25 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 44 c2o8jC_ not modelled 13.0 20 PDB header:transferase Chain: C: PDB Molecule:histone-lysine n-methyltransferase, h3 lysine-9 PDBTitle: human euchromatic histone methyltransferase 2 45 c3pgwB_ not modelled 12.8 19 PDB header:splicing/dna/rna Chain: B: PDB Molecule:sm b; PDBTitle: crystal structure of human u1 snrnp 46 d1d3bb_ not modelled 12.6 19 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 47 c1b34A_ not modelled 12.5 14 PDB header:rna binding protein Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain 48 d1b34a_ not modelled 12.5 14 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 49 c3rq4A_ not modelled 12.4 20 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv420h2; PDBTitle: crystal structure of suppressor of variegation 4-20 homolog 2 50 c3bo5A_ not modelled 12.3 27 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase setmar; PDBTitle: crystal structure of methyltransferase domain of human histone-lysine2 n-methyltransferase setmar 51 c2pn0D_ not modelled 12.1 21 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 52 d1vcpa_ not modelled 12.0 18 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 53 c3swnA_ not modelled 11.8 23 PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 54 d1cxla3 not modelled 11.8 20 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 55 c3swnC_ not modelled 11.5 14 PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 56 d2fwka1 not modelled 11.4 23 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 57 c3mekA_ not modelled 11.3 38 PDB header:transferase Chain: A: PDB Molecule:set and mynd domain-containing protein 3; PDBTitle: crystal structure of human histone-lysine n-2 methyltransferase smyd3 in complex with s-adenosyl-l-3 methionine 58 c2qpwA_ not modelled 11.2 40 PDB header:transcription Chain: A: PDB Molecule:pr domain zinc finger protein 2; PDBTitle: methyltransferase domain of human pr domain-containing2 protein 2 59 d1i4k1_ not modelled 11.0 23 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 60 c2r3aA_ not modelled 11.0 20 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv39h2; PDBTitle: methyltransferase domain of human suppressor of variegation2 3-9 homolog 2 61 c1mvhA_ not modelled 10.5 20 PDB header:transferase Chain: A: PDB Molecule:cryptic loci regulator 4; PDBTitle: structure of the set domain histone lysine2 methyltransferase clr4 62 d1mvha_ not modelled 10.5 20 Fold:beta-clip Superfamily:SET domain Family:Histone lysine methyltransferases 63 d1d3ba_ not modelled 10.4 18 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 64 d1wyka_ not modelled 10.3 22 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 65 c3qwvA_ not modelled 10.2 31 PDB header:transferase Chain: A: PDB Molecule:set and mynd domain-containing protein 2; PDBTitle: crystal structure of histone lysine methyltransferase smyd2 in complex2 with the cofactor product adohcy 66 c3pgwQ_ not modelled 10.0 19 PDB header:splicing/dna/rna Chain: Q: PDB Molecule:sm b; PDBTitle: crystal structure of human u1 snrnp 67 d1i8fa_ not modelled 9.8 10 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 68 c3rayA_ not modelled 9.7 33 PDB header:transcription Chain: A: PDB Molecule:pr domain-containing protein 11; PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 11 69 d1u0ma2 not modelled 9.5 22 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 70 c3ep0A_ not modelled 9.2 21 PDB header:transferase Chain: A: PDB Molecule:pr domain zinc finger protein 12; PDBTitle: methyltransferase domain of human pr domain-containing2 protein 12 71 d1mgqa_ not modelled 9.2 9 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 72 c1kxfA_ not modelled 9.1 22 PDB header:viral protein Chain: A: PDB Molecule:sindbis virus capsid protein; PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii) 73 d1ep5a_ not modelled 9.0 16 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 74 d1r3ea1 not modelled 8.7 20 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 75 c3cw1Z_ not modelled 8.7 14 PDB header:splicing Chain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp 76 c3cw1A_ not modelled 8.6 19 PDB header:splicing Chain: A: PDB Molecule:small nuclear ribonucleoprotein-associated proteins b and PDBTitle: crystal structure of human spliceosomal u1 snrnp 77 c3swnT_ not modelled 8.5 18 PDB header:rna binding protein Chain: T: PDB Molecule:u6 snrna-associated sm-like protein lsm6; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings 78 d1svdm1 not modelled 8.5 12 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 79 d1qexa_ not modelled 8.5 15 Fold:gp9 Superfamily:gp9 Family:gp9 80 d1d3bl_ not modelled 8.2 19 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 81 d1y0ya1 not modelled 8.2 21 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 82 d1jbma_ not modelled 8.0 9 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 83 d1bxni_ not modelled 8.0 27 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 84 d2h2ja2 not modelled 7.9 31 Fold:beta-clip Superfamily:SET domain Family:RuBisCo LSMT catalytic domain 85 d1th7a1 not modelled 7.9 14 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 86 c3lazB_ not modelled 7.8 32 PDB header:lyase Chain: B: PDB Molecule:d-galactarate dehydratase; PDBTitle: the crystal structure of the n-terminal domain of d-2 galactarate dehydratase from escherichia coli cft073 87 d1bwvs_ not modelled 7.6 27 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 88 c3cw15_ not modelled 7.5 14 PDB header:splicing Chain: 5: PDB Molecule:small nuclear ribonucleoprotein g; PDB Fragment:residues 1-215; PDBTitle: crystal structure of human spliceosomal u1 snrnp 89 d3bmva3 not modelled 7.4 23 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 90 d1h641_ not modelled 7.4 14 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP 91 c3izcs_ not modelled 7.3 16 PDB header:ribosome Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 92 d1gtta1 not modelled 7.3 32 Fold:FAH Superfamily:FAH Family:FAH 93 d1lcka1 not modelled 7.1 11 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 94 c3bboW_ not modelled 7.0 29 PDB header:ribosome Chain: W: PDB Molecule:ribosomal protein l24; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 95 d1pama3 not modelled 7.0 21 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 96 d1gtta2 not modelled 6.8 26 Fold:FAH Superfamily:FAH Family:FAH 97 d1wh3a_ not modelled 6.8 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 98 d1sawa_ not modelled 6.5 14 Fold:FAH Superfamily:FAH Family:FAH 99 c2dxcG_ not modelled 6.4 20 PDB header:hydrolase Chain: G: PDB Molecule:thiocyanate hydrolase subunit alpha; PDBTitle: recombinant thiocyanate hydrolase, fully-matured form