PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3izcs_

Fold library id	PDB Header	Molecule	Title
c3izcs_	PDB header: ribosome	Chain: S: PDB Molecule: 60s ribosomal protein rpl20 (l18ae);	PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome

Links to external resources
Added to library: Sat Dec 11 13:55:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M G G I R E K K A E Y F A K L R E Y L E E Y K S L F V V G V D N V S S Q Q M H E V R K E L R G R A V V L M G K N T M V R R A I R G F L S D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S
S
T T S
S S S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P D F E K L L P F V K G N V G F V F T N E P L T E I K N V I V S N R V A A P A R A G A V A P E D I W V R A V N T G M E P G K T S F F Q A L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
S S S S
S
T T
B
S S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V P T K I A R G T I E I V S D V K V V D A G N K V G Q S E A S L L N L L N I S P F T F G L T V V Q V Y D N G Q V F P S S I L D I T D E E L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S B
T
S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . .

Sequence S H F V S A V S T I A S I S L A I G Y P T L P S V G H T L I N N Y K D L L A V A I A A S Y H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	G	I	R	E	K	K	A	E	Y	F	A	K	L	R	E	Y	L	E	E	Y	K	S	L	F	V	V	G	V	D	N	V	S	S	Q	Q	M	H	E	V	R	K	E	L	R	G	R	A	V	V	L	M	G	K	N	T	M	V	R	R	A	I	R	G	F	L	S	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S		S	S														S								T	T	S																						S	S	S	S										T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	D	F	E	K	L	L	P	F	V	K	G	N	V	G	F	V	F	T	N	E	P	L	T	E	I	K	N	V	I	V	S	N	R	V	A	A	P	A	R	A	G	A	V	A	P	E	D	I	W	V	R	A	V	N	T	G	M	E	P	G	K	T	S	F	F	Q	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S	S					S	S							S	S												S								T	T		B		S	S													S	S								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	P	T	K	I	A	R	G	T	I	E	I	V	S	D	V	K	V	V	D	A	G	N	K	V	G	Q	S	E	A	S	L	L	N	L	L	N	I	S	P	F	T	F	G	L	T	V	V	Q	V	Y	D	N	G	Q	V	F	P	S	S	I	L	D	I	T	D	E	E	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T													T	T	S	B													T							S									T	T									S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Sequence	S	H	F	V	S	A	V	S	T	I	A	S	I	S	L	A	I	G	Y	P	T	L	P	S	V	G	H	T	L	I	N	N	Y	K	D	L	L	A	V	A	I	A	A	S	Y	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T			S	T	T	T																			S