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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3swnA_

Fold library idPDB HeaderMoleculeTitle
c3swnA_PDB header: rna binding proteinChain: A: PDB Molecule: u6 snrna-associated sm-like protein lsm5;PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings


Added to library: Sat Oct 29 16:18:56 2011
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKHSEMLLNGNGMCML
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Known secondary structure (DSSP)


TTTSSSS
TT

SSS


STT
 ......
Sequence IPGGKP
Predicted secondary structure



SS confidence





Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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