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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c3cw1D_ | PDB header: splicing | Chain: D: PDB Molecule: small nuclear ribonucleoprotein sm d3; | PDBTitle: crystal structure of human spliceosomal u1 snrnp |
| Added to library: Sat Aug 28 17:36:20 2010 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | P | I | K | V | L | H | E | A | E | G | H | I | V | T | C | E | T | N | T | G | E | V | Y | R | G | K | L | I | E | A | E | D | N | M | N | C | Q | M | S | N | I | T | V | T | Y | R | D | G | R | V | A | Q | L | E | Q | V | Y | I | R | G | C | K | I | R | F | L | I | L | P | D |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | T | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | S | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | |||||||||||||
| Sequence | M | L | K | N | A | P | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S |
| Download: | PDB structure | FASTA sequence |
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