Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	M	V	T	V	V	S	N	Y	C	Q	L	S	Q	T	Q	L	S	Q	T	F	A	E	K	F	T	V	T	E	E	L	L	Q	S	L	K	K	T	A	L	S	G	D	E	E	S	I	E	L	L	H	N	I	A	L	G	Y	D	K	F
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?																		?		?											?	?	?	?	?	?															?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		G	K	E	A	E	D	I	L	Y	H	I	V	R	T	P	T	N	E	T	L	S	I	I	R	L	I	K	N	A	C	L	K	L	Y	N	L	A	H	I	A	T	N	S	P	L	K	S	H	D	S	D	D	L	L	F	K	K	L	F	S
Secondary structure
SS confidence
Disorder																	?	?	?	?	?	?																?	?	?	?	?	?	?	?		?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		P	S	K	L	M	T	I	I	G	D	E	I	P	L	I	S	E	K	Q	S	L	S	K	V	L	L	N	D	E	N	N	E	L	S	D	G	T	N	F	W	D	K	N	R	Q	L	T	T	D	E	I	A	C	Y	L	Q	K	I	A	A
Secondary structure
SS confidence
Disorder															?																?	?	?	?	?	?	?	?	?	?																	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		N	A	K	N	T	Q	V	N	Y	P	T	G	L	Y	V	P	Y	S	T	R	T	H	L	E	D	A	L	N	E	N	I	K	S	D	P	S	W	P	N	E	V	Q	L	F	P	I	N	T	G	G	H	W	I	L	V	S	L	Q	K	I
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?																						?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		V	N	K	K	N	N	K	L	Q	I	K	C	V	I	F	N	S	L	R	A	L	G	Y	D	K	E	N	S	L	K	R	V	I	N	S	F	N	S	E	L	M	G	E	M	S	N	N	N	I	K	V	H	L	N	E	P	E	I	I	F
Secondary structure
SS confidence
Disorder			?	?	?	?	?																?	?	?	?										?	?								?	?	?		?	?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		L	H	A	D	L	Q	Q	Y	L	S	Q	S	C	G	A	F	V	C	M	A	A	Q	E	V	I	E	Q	R	E	S	N	S	D	S	A	P	Y	T	L	L	K	N	H	A	D	R	F	K	K	Y	S	A	E	E	Q	Y	E	I	D	F
Secondary structure
SS confidence
Disorder																													?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Sequence		Q	H	R	L	A	N	R	N	C	Y	L	D	K	Y	G	D	A	N	I	N	H	Y	Y	R	N	L	E	I	K	H	S	Q	P	K	N	R	A	S	G	K	R	V	S
Secondary structure
SS confidence
Disorder																														?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1euv chain A Region: 210 - 343 Aligned: 117 Modelled: 134 Confidence: 97.9% Identity: 19% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 2g4d chain A domain 1 Region: 212 - 343 Aligned: 116 Modelled: 132 Confidence: 97.6% Identity: 19% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 2bkr chain A domain 1 Region: 204 - 350 Aligned: 125 Modelled: 147 Confidence: 97.5% Identity: 18% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 2oix chain A Region: 215 - 324 Aligned: 86 Modelled: 96 Confidence: 97.3% Identity: 15% PDB header:hydrolase Chain: A: PDB Molecule:xanthomonas outer protein d; PDBTitle: xanthomonas xopd c470a mutant Phyre2 PDB 3eay chain A Region: 215 - 356 Aligned: 138 Modelled: 142 Confidence: 97.2% Identity: 13% PDB header:hydrolase Chain: A: PDB Molecule:sentrin-specific protease 7; PDBTitle: crystal structure of the human senp7 catalytic domain Phyre2 PDB 1th0 chain A Region: 212 - 343 Aligned: 120 Modelled: 132 Confidence: 97.0% Identity: 18% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 2iy1 chain A domain 1 Region: 205 - 343 Aligned: 125 Modelled: 139 Confidence: 96.8% Identity: 18% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 1nln chain A Region: 216 - 319 Aligned: 87 Modelled: 104 Confidence: 68.5% Identity: 26% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Adenain-like Phyre2 PDB 1xd3 chain A Region: 274 - 354 Aligned: 74 Modelled: 81 Confidence: 58.4% Identity: 16% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Ubiquitin carboxyl-terminal hydrolase UCH-L Phyre2 PDB 2cpq chain A domain 1 Region: 16 - 41 Aligned: 26 Modelled: 26 Confidence: 56.6% Identity: 38% Fold: Eukaryotic type KH-domain (KH-domain type I) Superfamily: Eukaryotic type KH-domain (KH-domain type I) Family: Eukaryotic type KH-domain (KH-domain type I) Phyre2 PDB 2etl chain A domain 1 Region: 277 - 354 Aligned: 71 Modelled: 78 Confidence: 55.7% Identity: 18% Fold: Cysteine proteinases Superfamily: Cysteine proteinases Family: Ubiquitin carboxyl-terminal hydrolase UCH-L Phyre2 PDB 2wdt chain A Region: 306 - 354 Aligned: 46 Modelled: 46 Confidence: 46.9% Identity: 22% PDB header:hydrolase/protein binding Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3; PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme Phyre2 PDB 3a7s chain A Region: 306 - 354 Aligned: 43 Modelled: 49 Confidence: 24.6% Identity: 12% PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase isozyme l5; PDBTitle: catalytic domain of uch37 Phyre2 PDB 3mst chain A Region: 308 - 361 Aligned: 48 Modelled: 49 Confidence: 17.5% Identity: 23% PDB header:transport protein Chain: A: PDB Molecule:putative nitrate transport protein; PDBTitle: crystal structure of a putative nitrate transport protein (tvn0104)2 from thermoplasma volcanium at 1.35 a resolution Phyre2 PDB 3ihr chain A Region: 306 - 354 Aligned: 43 Modelled: 48 Confidence: 15.9% Identity: 14% PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase isozyme l5; PDBTitle: crystal structure of uch37 Phyre2 PDB 1cja chain A Region: 59 - 84 Aligned: 26 Modelled: 26 Confidence: 15.0% Identity: 15% Fold: Protein kinase-like (PK-like) Superfamily: Protein kinase-like (PK-like) Family: Actin-fragmin kinase, catalytic domain Phyre2 PDB 3zrh chain A Region: 161 - 217 Aligned: 52 Modelled: 57 Confidence: 13.8% Identity: 23% PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin thioesterase zranb1; PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd) Phyre2 PDB 3dcy chain A Region: 213 - 262 Aligned: 47 Modelled: 50 Confidence: 13.4% Identity: 17% PDB header:apoptosis regulator Chain: A: PDB Molecule:regulator protein; PDBTitle: crystal structure a tp53-induced glycolysis and apoptosis2 regulator protein from homo sapiens. Phyre2 PDB 2qqp chain D Region: 74 - 88 Aligned: 15 Modelled: 15 Confidence: 13.0% Identity: 27% PDB header:virus Chain: D: PDB Molecule:small capsid protein; PDBTitle: crystal structure of authentic providence virus Phyre2 PDB 2of6 chain C Region: 311 - 316 Aligned: 6 Modelled: 6 Confidence: 10.7% Identity: 50% PDB header:virus Chain: C: PDB Molecule:envelope glycoprotein e; PDBTitle: structure of immature west nile virus Phyre2 1 d1euva_ 2 d2g4da1 3 d2bkra1 4 c2oixA_ 5 c3eayA_ 6 d1th0a_ 7 d2iy1a1 8 d1nlna_ 9 d1xd3a_ 10 d2cpqa1 11 d2etla1 12 c2wdtA_ 13 c3a7sA_ 14 c3mstA_ 15 c3ihrA_ 16 d1cjaa_ 17 c3zrhA_ 18 c3dcyA_ 19 c2qqpD_ 20 c2of6C_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1euva_ 97.9 19 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 2 d2g4da1 97.6 19 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 3 d2bkra1 97.5 18 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 4 c2oixA_ 97.3 15 PDB header:hydrolase Chain: A: PDB Molecule:xanthomonas outer protein d; PDBTitle: xanthomonas xopd c470a mutant 5 c3eayA_ 97.2 13 PDB header:hydrolase Chain: A: PDB Molecule:sentrin-specific protease 7; PDBTitle: crystal structure of the human senp7 catalytic domain 6 d1th0a_ 97.0 18 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 7 d2iy1a1 96.8 18 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 8 d1nlna_ 68.5 26 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 9 d1xd3a_ 58.4 16 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Ubiquitin carboxyl-terminal hydrolase UCH-L 10 d2cpqa1 56.6 38 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 11 d2etla1 55.7 18 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Ubiquitin carboxyl-terminal hydrolase UCH-L 12 c2wdtA_ 46.9 22 PDB header:hydrolase/protein binding Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3; PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme 13 c3a7sA_ 24.6 12 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase isozyme l5; PDBTitle: catalytic domain of uch37 14 c3mstA_ 17.5 23 PDB header:transport protein Chain: A: PDB Molecule:putative nitrate transport protein; PDBTitle: crystal structure of a putative nitrate transport protein (tvn0104)2 from thermoplasma volcanium at 1.35 a resolution 15 c3ihrA_ 15.9 14 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase isozyme l5; PDBTitle: crystal structure of uch37 16 d1cjaa_ 15.0 15 Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Actin-fragmin kinase, catalytic domain 17 c3zrhA_ 13.8 23 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin thioesterase zranb1; PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd) 18 c3dcyA_ 13.4 17 PDB header:apoptosis regulator Chain: A: PDB Molecule:regulator protein; PDBTitle: crystal structure a tp53-induced glycolysis and apoptosis2 regulator protein from homo sapiens. 19 c2qqpD_ 13.0 27 PDB header:virus Chain: D: PDB Molecule:small capsid protein; PDBTitle: crystal structure of authentic providence virus 20 c2of6C_ 10.7 50 PDB header:virus Chain: C: PDB Molecule:envelope glycoprotein e; PDBTitle: structure of immature west nile virus 21 d1s2xa_ not modelled 10.7 47 Fold:STAT-like Superfamily:Cag-Z Family:Cag-Z 22 c1s2xA_ not modelled 10.7 47 PDB header:unknown function Chain: A: PDB Molecule:cag-z; PDBTitle: crystal structure of cag-z from helicobacter pylori 23 d1z21a1 not modelled 10.6 21 Fold:Type III secretion system domain Superfamily:Type III secretion system domain Family:YopR Core 24 c2i3eA_ not modelled 10.3 20 PDB header:hydrolase Chain: A: PDB Molecule:g-rich; PDBTitle: solution structure of catalytic domain of goldfish rich2 protein 25 d1aina_ not modelled 10.0 23 Fold:Annexin Superfamily:Annexin Family:Annexin 26 c1uzgA_ not modelled 9.9 50 PDB header:viral protein Chain: A: PDB Molecule:major envelope protein e; PDBTitle: crystal structure of the dengue type 3 virus envelope2 protein 27 d1u7za_ not modelled 9.9 15 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 28 c2ka2A_ not modelled 9.8 43 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 29 c2ka1B_ not modelled 9.8 43 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 30 d1zrua3 not modelled 9.7 27 Fold:Pseudo beta-prism Superfamily:Bacteriophage trimeric proteins domain Family:Lactophage receptor-binding protein N-terminal domain 31 c2ka2B_ not modelled 9.3 43 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 32 c2ka1A_ not modelled 9.3 43 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 33 d2arha1 not modelled 9.1 41 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:Aq 1966-like 34 d1svba2 not modelled 9.0 50 Fold:Viral glycoprotein, central and dimerisation domains Superfamily:Viral glycoprotein, central and dimerisation domains Family:Viral glycoprotein, central and dimerisation domains 35 c3lcnC_ not modelled 8.8 46 PDB header:nuclear protein Chain: C: PDB Molecule:mrna transport factor gfd1; PDBTitle: nab2:gfd1 complex 36 c3lcnD_ not modelled 8.5 46 PDB header:nuclear protein Chain: D: PDB Molecule:mrna transport factor gfd1; PDBTitle: nab2:gfd1 complex 37 d1sjpa2 not modelled 8.3 28 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:GroEL-like chaperone, apical domain 38 c2f9jP_ not modelled 8.2 27 PDB header:rna binding protein Chain: P: PDB Molecule:splicing factor 3b subunit 1; PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155 39 d1ok8a2 not modelled 8.2 50 Fold:Viral glycoprotein, central and dimerisation domains Superfamily:Viral glycoprotein, central and dimerisation domains Family:Viral glycoprotein, central and dimerisation domains 40 c2j5dA_ not modelled 7.9 50 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles 41 c1p58C_ not modelled 7.8 50 PDB header:virus Chain: C: PDB Molecule:major envelope protein e; PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction 42 c3uajA_ not modelled 7.8 50 PDB header:viral protein/immune system Chain: A: PDB Molecule:envelope protein; PDBTitle: crystal structure of the envelope glycoprotein ectodomain from dengue2 virus serotype 4 in complex with the fab fragment of the chimpanzee3 monoclonal antibody 5h2 43 d1f74a_ not modelled 7.7 21 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 44 c1urzC_ not modelled 7.7 50 PDB header:virus/viral protein Chain: C: PDB Molecule:envelope protein; PDBTitle: low ph induced, membrane fusion conformation of the2 envelope protein of tick-borne encephalitis virus 45 d1o22a_ not modelled 7.3 70 Fold:Hypothetical protein TM0875 Superfamily:Hypothetical protein TM0875 Family:Hypothetical protein TM0875 46 d1ufwa_ not modelled 7.1 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 47 d1rmka_ not modelled 6.8 83 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Conotoxin 48 c3dxeC_ not modelled 6.7 24 PDB header:protein binding Chain: C: PDB Molecule:amyloid beta a4 protein-binding family b member PDBTitle: crystal structure of the intracellular domain of human app2 (t668a mutant) in complex with fe65-ptb2 49 c3c6dB_ not modelled 6.6 50 PDB header:virus Chain: B: PDB Molecule:polyprotein; PDBTitle: the pseudo-atomic structure of dengue immature virus 50 c3siiA_ not modelled 6.5 35 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:poly(adp-ribose) glycohydrolase; PDBTitle: the x-ray crystal structure of poly(adp-ribose) glycohydrolase bound2 to the inhibitor adp-hpd from thermomonospora curvata 51 c3ogzA_ not modelled 6.1 20 PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form 52 d1dm5a_ not modelled 6.1 23 Fold:Annexin Superfamily:Annexin Family:Annexin 53 d1srva_ not modelled 5.9 31 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:GroEL-like chaperone, apical domain 54 d2ptza1 not modelled 5.8 16 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase 55 c1bmxA_ not modelled 5.8 32 PDB header:viral protein Chain: A: PDB Molecule:human immunodeficiency virus type 1 capsid; PDBTitle: hiv-1 capsid protein major homology region peptide analog,2 nmr, 8 structures 56 d1vlya1 not modelled 5.7 15 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:Aminomethyltransferase beta-barrel domain Family:Aminomethyltransferase beta-barrel domain 57 c2vc6A_ not modelled 5.4 22 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound 58 d1sx5a_ not modelled 5.3 21 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease EcoRV 59 c1gp8A_ not modelled 5.2 13 PDB header:viral protein Chain: A: PDB Molecule:protein (scaffolding protein); PDBTitle: nmr solution structure of the coat protein-binding domain2 of bacteriophage p22 scaffolding protein 60 d1t6t1_ not modelled 5.2 8 Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain 61 d1k8ga2 not modelled 5.2 23 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 62 c1w9zB_ not modelled 5.1 35 PDB header:virus coat protein Chain: B: PDB Molecule:vp9; PDBTitle: structure of bannavirus vp9

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0