PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3mstA_

Fold library id	PDB Header	Molecule	Title
c3mstA_	PDB header: transport protein	Chain: A: PDB Molecule: putative nitrate transport protein;	PDBTitle: crystal structure of a putative nitrate transport protein (tvn0104)2 from thermoplasma volcanium at 1.35 a resolution

Links to external resources
Added to library: Sat Feb 12 08:59:47 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H E N L Y F Q G X D V G X P F S G P V S F P L L V I E E E L P F R I H N I C S E T G K F D V V L D S I T N X P K Y G L K I F A G V R I D X Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T
T T S G G G T G G G
S S
T T T
S G G G G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S I L G D E S S G R I Y T L R K G T L A D F N A R I L A Y Y D K A Q V I N A D G D T C I K X A N E G Y S A L V G N E I S I G K S F R N R X K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S T T S T
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E L G L D L P S C A X A S T R R I D E V I E A Y E Q G I D F I K N N H E R A A E I I S K K S G Y Y S E E V X K K I I G I Y G H E V T K K R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S S S
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence E L V G S R E L Y S R V V P E L N D I E I I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
G G G G G
B

Download: PDB structure FASTA sequence
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	E	N	L	Y	F	Q	G	X	D	V	G	X	P	F	S	G	P	V	S	F	P	L	L	V	I	E	E	E	L	P	F	R	I	H	N	I	C	S	E	T	G	K	F	D	V	V	L	D	S	I	T	N	X	P	K	Y	G	L	K	I	F	A	G	V	R	I	D	X	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S		T	T							T	T	S	G	G	G						T	G	G	G		S	S					T	T	T						S						G	G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	I	L	G	D	E	S	S	G	R	I	Y	T	L	R	K	G	T	L	A	D	F	N	A	R	I	L	A	Y	Y	D	K	A	Q	V	I	N	A	D	G	D	T	C	I	K	X	A	N	E	G	Y	S	A	L	V	G	N	E	I	S	I	G	K	S	F	R	N	R	X	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S					S	S	T	T	S														T																	T	T							T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	L	G	L	D	L	P	S	C	A	X	A	S	T	R	R	I	D	E	V	I	E	A	Y	E	Q	G	I	D	F	I	K	N	N	H	E	R	A	A	E	I	I	S	K	K	S	G	Y	Y	S	E	E	V	X	K	K	I	I	G	I	Y	G	H	E	V	T	K	K	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											S	S																																S	S	S									G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	E	L	V	G	S	R	E	L	Y	S	R	V	V	P	E	L	N	D	I	E	I	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T		G	G	G	G	G			B