Email l.a.kelley@imperial.ac.uk Description P0A7A7 Date Thu Jan 5 11:05:13 GMT 2012 Unique Job ID 9c74607744eb9073

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1iuqa_ 97.5 16 Fold:Glycerol-3-phosphate (1)-acyltransferase Superfamily:Glycerol-3-phosphate (1)-acyltransferase Family:Glycerol-3-phosphate (1)-acyltransferase 2 d2a07f1 31.6 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 3 c3hqdB_ 29.7 20 PDB header:motor protein Chain: B: PDB Molecule:kinesin-like protein kif11; PDBTitle: human kinesin eg5 motor domain in complex with amppnp and2 mg2+ 4 c2jlhA_ 28.3 18 PDB header:protein transport Chain: A: PDB Molecule:yop proteins translocation protein u; PDBTitle: crystal structure of the cytoplasmic domain of yersinia2 pestis yscu n263a mutant 5 d2dpwa1 28.0 25 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:TTHA0179-like 6 c3tevA_ 26.7 22 PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hyrolase, family 3; PDBTitle: the crystal structure of glycosyl hydrolase from deinococcus2 radiodurans r1 7 d1tr9a_ 25.8 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:NagZ-like 8 d2p6ra1 25.3 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 9 d1t3la2 21.7 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 10 c1e17A_ 20.8 19 PDB header:dna binding domain Chain: A: PDB Molecule:afx; PDBTitle: solution structure of the dna binding domain of the human2 forkhead transcription factor afx (foxo4) 11 c3s2wB_ 19.7 18 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1 12 d1vyva2 18.7 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 13 d1t0hb_ 18.3 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 14 d1vyua2 17.4 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 15 d1ry6a_ 16.9 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Motor proteins 16 c1ry6A_ 16.9 14 PDB header:transport protein Chain: A: PDB Molecule:internal kinesin; PDBTitle: crystal structure of internal kinesin motor domain 17 d1wj5a_ 16.3 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:An Obfc1 domain 18 d1z6ra1 16.1 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ROK associated domain 19 d2c6ya1 15.9 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 20 d1mvoa_ 15.5 14 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 21 c1sfeA_ not modelled 15.2 57 PDB header:dna-binding protein Chain: A: PDB Molecule:ada o6-methylguanine-dna methyltransferase; PDBTitle: ada o6-methylguanine-dna methyltransferase from escherichia coli 22 c2jk1A_ not modelled 14.7 7 PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain 23 c3t6aB_ not modelled 14.5 15 PDB header:signaling protein Chain: B: PDB Molecule:breast cancer anti-estrogen resistance protein 3; PDBTitle: structure of the c-terminal domain of bcar3 24 c3c00B_ not modelled 14.4 11 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:escu; PDBTitle: crystal structural of the mutated g247t escu/spas c-terminal domain 25 c2k29A_ not modelled 14.1 13 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 26 c2wbeC_ not modelled 14.0 17 PDB header:structural protein Chain: C: PDB Molecule:bipolar kinesin krp-130; PDBTitle: kinesin-5-tubulin complex with amppnp 27 d1x88a1 not modelled 13.8 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Motor proteins 28 c3lk6A_ not modelled 13.2 25 PDB header:hydrolase Chain: A: PDB Molecule:lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase n318d mutant (ybbd_n318d) from bacillus subtilis 29 d2qzga1 not modelled 13.0 12 Fold:Bromodomain-like Superfamily:Ta0600-like Family:Ta0600-like 30 c1wrjA_ not modelled 12.9 57 PDB header:transferase Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: crystal structure of o6-methylguanine methyltransferase2 from sulfolobus tokodaii 31 c3g73A_ not modelled 12.5 11 PDB header:transcription/dna Chain: A: PDB Molecule:forkhead box protein m1; PDBTitle: structure of the foxm1 dna binding 32 c3sqlB_ not modelled 12.2 17 PDB header:hydrolase Chain: B: PDB Molecule:glycosyl hydrolase family 3; PDBTitle: crystal structure of glycoside hydrolase from synechococcus 33 d1q42a_ not modelled 12.2 39 Fold:Cystatin-like Superfamily:NTF2-like Family:NTF2-like 34 c2vt1B_ not modelled 12.1 17 PDB header:membrane protein Chain: B: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structure of the cytoplasmic domain of spa40, the2 specificity switch for the shigella flexneri type iii3 secretion system 35 c2ctuA_ not modelled 11.9 50 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 483; PDBTitle: solution structure of zinc finger domain from human zn2 finger protein 483 36 c2byvE_ not modelled 11.3 13 PDB header:regulation Chain: E: PDB Molecule:rap guanine nucleotide exchange factor 4; PDBTitle: structure of the camp responsive exchange factor epac2 in2 its auto-inhibited state 37 d2cqna1 not modelled 11.3 27 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 38 c1t39A_ not modelled 11.0 57 PDB header:transferase/dna Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: human o6-alkylguanine-dna alkyltransferase covalently2 crosslinked to dna 39 d1lj5a_ not modelled 10.8 9 Fold:Serpins Superfamily:Serpins Family:Serpins 40 c3nwrA_ not modelled 10.7 16 PDB header:lyase Chain: A: PDB Molecule:a rubisco-like protein; PDBTitle: crystal structure of a rubisco-like protein from burkholderia fungorum 41 c3i71B_ not modelled 10.1 28 PDB header:unknown function Chain: B: PDB Molecule:ethanolamine utilization protein eutk; PDBTitle: ethanolamine utilization microcompartment shell subunit, eutk c-2 terminal domain 42 c3r4kD_ not modelled 10.1 16 PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution 43 c2ijeS_ not modelled 10.1 18 PDB header:signaling protein Chain: S: PDB Molecule:guanine nucleotide-releasing protein; PDBTitle: crystal structure of the cdc25 domain of rasgrf1 44 c2fyuE_ not modelled 10.1 64 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 45 c3bmxB_ not modelled 9.9 25 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase (ybbd) from bacillus subtilis 46 c3ndaA_ not modelled 9.9 16 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:serpin-2; PDBTitle: crystal structure of serpin from tick ixodes ricinus 47 d1whna_ not modelled 9.8 18 Fold:dsRBD-like Superfamily:dsRNA-binding domain-like Family:Double-stranded RNA-binding domain (dsRBD) 48 c3co7C_ not modelled 9.6 16 PDB header:transcription/dna Chain: C: PDB Molecule:forkhead box protein o1; PDBTitle: crystal structure of foxo1 dbd bound to dbe2 dna 49 d1seka_ not modelled 9.5 14 Fold:Serpins Superfamily:Serpins Family:Serpins 50 d1dqna_ not modelled 9.4 14 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 51 c3ozqA_ not modelled 9.2 16 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:serpin48; PDBTitle: crystal structure of serpin48, which is a highly specific serpin in2 the insect tenebrio molitor 52 c1p84E_ not modelled 8.9 50 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 53 d2qsba1 not modelled 8.8 17 Fold:Bromodomain-like Superfamily:Ta0600-like Family:Ta0600-like 54 d2hfha_ not modelled 8.7 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 55 d1ykwa1 not modelled 8.7 14 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 56 c3c01H_ not modelled 8.5 20 PDB header:membrane protein, protein transport Chain: H: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structural of native spas c-terminal domain 57 c3psfA_ not modelled 8.0 19 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) 58 c2l25A_ not modelled 7.9 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: np_888769.1 59 d8ruca1 not modelled 7.8 12 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 60 d1kcfa2 not modelled 7.7 15 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Mitochondrial resolvase ydc2 catalytic domain 61 d1jm6a1 not modelled 7.7 19 Fold:Bromodomain-like Superfamily:alpha-ketoacid dehydrogenase kinase, N-terminal domain Family:alpha-ketoacid dehydrogenase kinase, N-terminal domain 62 c2h4qA_ not modelled 7.5 15 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:heterochromatin-associated protein ment; PDBTitle: crystal structure of a m-loop deletion variant of ment in2 the cleaved conformation 63 c3kcnA_ not modelled 7.4 5 PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase homolog; PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica 64 c1mgtA_ not modelled 7.4 71 PDB header:transferase Chain: A: PDB Molecule:protein (o6-methylguanine-dna methyltransferase); PDBTitle: crystal structure of o6-methylguanine-dna methyltransferase from2 hyperthermophilic archaeon pyrococcus kodakaraensis strain kod1 65 c3t7yB_ not modelled 7.3 17 PDB header:protein transport Chain: B: PDB Molecule:yop proteins translocation protein u; PDBTitle: structure of an autocleavage-inactive mutant of the cytoplasmic domain2 of ct091, the yscu homologue of chlamydia trachomatis 66 c2kk6A_ not modelled 7.3 22 PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fer; PDBTitle: solution structure of sh2 domain of proto-oncogene tyrosine-2 protein kinase fer from homo sapiens, northeast structural3 genomics consortium (nesg) target hr3461d 67 c3igzB_ not modelled 7.3 22 PDB header:isomerase Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration 68 d1ej7l1 not modelled 7.3 13 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 69 d1svda1 not modelled 7.2 18 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 70 c2vh4B_ not modelled 7.2 13 PDB header:hydrolase inhibitor Chain: B: PDB Molecule:tengpin; PDBTitle: structure of a loop c-sheet serpin polymer 71 d1d7ka2 not modelled 7.2 24 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 72 d3bzra1 not modelled 7.1 12 Fold:EscU C-terminal domain-like Superfamily:EscU C-terminal domain-like Family:EscU C-terminal domain-like 73 c3bzrA_ not modelled 7.1 12 PDB header:membrane protein, protein transport Chain: A: PDB Molecule:escu; PDBTitle: crystal structure of escu c-terminal domain with n262d mutation, space2 group p 41 21 2 74 c2fynO_ not modelled 7.1 50 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 75 d3bpya1 not modelled 7.1 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 76 d1k9oi_ not modelled 7.0 14 Fold:Serpins Superfamily:Serpins Family:Serpins 77 c1hleA_ not modelled 6.9 17 PDB header:hydrolase inhibitor(serine proteinase) Chain: A: PDB Molecule:horse leukocyte elastase inhibitor; PDBTitle: crystal structure of cleaved equine leucocyte elastase2 inhibitor determined at 1.95 angstroms resolution 78 c2imgA_ not modelled 6.9 33 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 23; PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion 79 d1kq8a_ not modelled 6.6 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 80 c1kq8A_ not modelled 6.6 27 PDB header:transcription Chain: A: PDB Molecule:hepatocyte nuclear factor 3 forkhead homolog 1; PDBTitle: solution structure of winged helix protein hfh-1 81 c2hxhC_ not modelled 6.5 19 PDB header:transport protein Chain: C: PDB Molecule:kinesin-like protein kif1a; PDBTitle: kif1a head-microtubule complex structure in adp-form 82 c3euhB_ not modelled 6.5 18 PDB header:cell cycle Chain: B: PDB Molecule:chromosome partition protein mukf; PDBTitle: crystal structure of the muke-mukf complex 83 c1sngA_ not modelled 6.4 22 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:cog4826: serine protease inhibitor; PDBTitle: structure of a thermophilic serpin in the native state 84 d1imva_ not modelled 6.3 19 Fold:Serpins Superfamily:Serpins Family:Serpins 85 d2doea1 not modelled 6.2 14 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 86 d2qlvb1 not modelled 6.0 36 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like 87 c3rgqA_ not modelled 6.0 22 PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1; PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p 88 d1x38a1 not modelled 5.9 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:NagZ-like 89 d1riea_ not modelled 5.9 64 Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP) 90 c3qfwB_ not modelled 5.8 20 PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris 91 c1t5cA_ not modelled 5.7 12 PDB header:contractile protein Chain: A: PDB Molecule:centromeric protein e; PDBTitle: crystal structure of the motor domain of human kinetochore2 protein cenp-e 92 d2z15a1 not modelled 5.7 10 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 93 c3fcnA_ not modelled 5.7 18 PDB header:unknown function Chain: A: PDB Molecule:an alpha-helical protein of unknown function (pfam01724); PDBTitle: crystal structure of an alpha-helical protein of unknown function2 (rru_a3208) from rhodospirillum rubrum atcc 11170 at 1.45 a3 resolution 94 d3e9va1 not modelled 5.6 14 Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like 95 d1sfea1 not modelled 5.6 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Methylated DNA-protein cysteine methyltransferase, C-terminal domain Family:Methylated DNA-protein cysteine methyltransferase, C-terminal domain 96 c2k7rA_ not modelled 5.5 11 PDB header:replication Chain: A: PDB Molecule:primosomal protein dnai; PDBTitle: n-terminal domain of the bacillus subtilis helicase-loading2 protein dnai 97 c2ia2D_ not modelled 5.5 12 PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 98 c2nvgA_ not modelled 5.4 45 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit; PDBTitle: soluble domain of rieske iron sulfur protein. 99 d2bsqe1 not modelled 5.4 29 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Trafficking protein A-like