Fold library entry viewer: c2byvE_

Added to library: Tue Mar 16 13:42:22 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	W	I	A	C	L	D	K	R	P	L	E	R	S	S	E	D	V	D	I	I	F	T	R	L	K	G	V	K	A	F	E	K	F	H	P	N	L	L	R	Q	I	C	L	C	G	Y	Y	E	N	L	E	K	G	I	T	L	F	R	Q	G	D	I	G	T	N	W	Y	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T	T																	G	G	G	T	T	S																			T	T						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	S	L	D	V	K	V	S	E	T	S	S	H	Q	D	A	V	T	I	C	T	L	G	I	G	T	A	F	G	E	S	I	L	D	N	T	P	R	H	A	T	I	V	T	R	E	S	S	E	L	L	R	I	E	Q	E	D	F	K	A	L	W	E	K	Y	R	Q	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								S	S	S		G	G	G									T	T					G	G	G	G	G	T				S	S					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	L	L	A	P	P	Y	G	V	M	E	T	G	S	N	N	V	P	S	E	K	I	L	R	A	G	K	I	L	R	I	A	I	L	S	R	A	P	H	M	I	R	D	R	K	Y	H	L	K	T	Y	R	Q	C	C	V	G	T	E	L	V	D	W	M	I	Q	Q	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S		T	T	T	S		S		S	S																									G	G	G	S						T	T																			T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	V	H	S	R	T	Q	A	V	G	M	W	Q	V	L	L	E	D	G	V	L	N	H	V	D	Q	E	R	H	F	Q	D	K	Y	L	F	Y	R	F	L	D	D	E	R	E	D	A	P	L	P	T	E	E	E	K	K	E	C	D	E	E	L	Q	D	T	M	L	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																	T	T	S				S	S			S	S			S	S	S						G	G	G	S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	M	G	P	D	A	H	M	R	M	I	L	R	K	P	P	G	Q	R	T	V	D	D	L	E	I	I	Y	D	E	L	L	H	I	K	A	L	S	H	L	S	T	T	V	K	R	E	L	A	G	V	L	I	F	E	S	H	A	K	G	G	T	V	L	F	N	Q	G	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S		G	G	G														T	T		G	G	G	T	T	S									T	T	T								S	T	T						T	T	S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	T	S	W	Y	I	I	L	K	G	S	V	N	V	V	I	Y	G	K	G	V	V	C	T	L	H	E	G	D	D	F	G	K	L	A	L	V	N	D	A	P	R	A	A	S	I	V	L	R	E	D	N	C	H	F	L	R	V	D	K	E	D	F	N	R	I	L	R	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S							T	T	T								T	T					G	G	G	G	T		S		B		S	S						S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	A	N	T	V	R	L	K	E	H	D	Q	D	V	L	V	L	E	K	V	P	A	Q	Q	K	Y	T	V	M	S	G	T	P	E	K	I	L	E	H	F	L	E	T	I	R	L	E	P	S	L	N	E	A	T	D	S	V	L	N	D	F	V	M	M	H	C	V	F	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						S	S	S	S																																				G	G	G																			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	T	Q	L	C	P	A	L	V	A	H	Y	H	A	Q	P	S	Q	G	T	E	Q	E	R	M	D	Y	A	L	N	N	K	R	R	V	I	R	L	V	L	Q	W	A	A	M	Y	G	D	L	L	Q	E	D	D	V	A	M	A	F	L	E	E	F	Y	V	S	V	S	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T					S	S																													T	T	T																				T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	M	M	A	A	F	K	E	Q	L	P	E	L	E	K	I	V	K	K	R	Q	P	I	R	G	S	D	E	V	L	F	K	V	Y	C	I	D	H	T	Y	T	T	I	R	V	P	V	A	A	S	V	K	E	V	I	S	A	V	A	D	K	L	G	S	G	E	G	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			T	T	T	T	T	S	T					T	T								S	S	S							B	B	T	T	T	B								T	T		B									G	G	G	S			S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	V	K	M	N	S	G	G	E	K	V	V	L	K	S	N	D	V	S	V	F	T	T	L	T	I	N	G	R	L	F	A	S	L	T	P	L	P	E	Q	E	G	P	T	T	G	T	V	G	T	F	E	L	M	S	S	K	D	L	A	Y	Q	M	T	T	Y	D	W	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								T	T		B			T	T	S	S		T	T											G	G	G	G			S	S				S	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	N	C	V	H	E	L	E	L	I	Y	H	T	F	G	R	H	N	F	K	K	T	T	A	N	L	D	L	F	L	R	R	F	N	E	I	Q	F	W	V	V	T	E	V	C	L	C	S	Q	L	S	K	R	V	Q	L	L	K	K	F	I	K	I	A	A	H	C	K	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													G	G	G	T	T																													S																					T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	N	L	N	S	F	F	A	I	V	M	G	L	S	N	V	A	V	S	R	L	A	L	T	W	E	K	L	P	S	K	F	K	K	F	Y	A	E	F	E	S	L	M	D	P	S	R	N	H	R	A	Y	R	L	T	A	A	K	L	E	P	P	L	I	P	F	M	P	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B													S					T								S															T															T	S		S	S		B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	K	D	M	T	F	T	H	E	G	N	K	T	F	I	D	N	L	V	N	F	E	K	M	R	M	I	A	N	T	A	R	T	V	R	Y	Y	R	S	Q	P	F	N	P	D	A	A	Q	A	N	K	N	H	Q	D	V	R	S	Y	V	R	Q	L	N	V	I	D	N	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		S	B	S	S	S	S																				S	S	S						S	S	S		S	S
	.	.	.	.	.	.	.	.	.	920	.	.
Sequence	T	L	S	Q	M	S	H	R	L	E	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S

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PDB structure

FASTA sequence

Hidden Markov model

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