Email l.a.kelley@imperial.ac.uk Description P46883 Date Thu Jan 5 12:04:33 GMT 2012 Unique Job ID 983566c31d2ddef1

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1d6uB_ 100.0 100 PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of e. coli amine oxidase anaerobically reduced with2 beta-phenylethylamine 2 c1ksiA_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of a eukaryotic (pea seedling) copper-containing2 amine oxidase at 2.2a resolution 3 c1ekmC_ 100.0 28 PDB header:oxidoreductase Chain: C: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure at 2.5 a resolution of zinc-substituted2 copper amine oxidase of hansenula polymorpha expressed in3 escherichia coli 4 c1ui7A_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:phenylethylamine oxidase; PDBTitle: site-directed mutagenesis of his433 involved in binding of2 copper ion in arthrobacter globiformis amine oxidase 5 c3nbbC_ 100.0 27 PDB header:oxidoreductase Chain: C: PDB Molecule:peroxisomal primary amine oxidase; PDBTitle: crystal structure of mutant y305f expressed in e. coli in the copper2 amine oxidase from hansenula polymorpha 6 c3loyB_ 100.0 28 PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of a copper-containing benzylamine oxidase from2 hansenula polymorpha 7 c3higB_ 100.0 24 PDB header:oxidoreductase Chain: B: PDB Molecule:amiloride-sensitive amine oxidase; PDBTitle: crystal structure of human diamine oxidase in complex with the2 inhibitor berenil 8 c3pgbA_ 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of aspergillus nidulans amine oxidase 9 c1n9eA_ 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:lysyl oxidase; PDBTitle: crystal structure of pichia pastoris lysyl oxidase pplo 10 c1w7cA_ 100.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:lysyl oxidase; PDBTitle: pplo at 1.23 angstroms 11 c2pncB_ 100.0 23 PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase, liver isozyme; PDBTitle: crystal structure of bovine plasma copper-containing amine oxidase in2 complex with clonidine 12 d1d6za1 100.0 100 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 13 d1w6ga1 100.0 31 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 14 d2oqea1 100.0 29 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 15 d1w2za1 100.0 32 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 16 d1w7ca1 100.0 25 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 17 d1d6za3 100.0 100 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 18 d1w6ga3 100.0 29 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 19 d1w2za3 100.0 20 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 20 d1d6za2 99.9 100 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 21 d2oqea2 not modelled 99.9 26 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 22 d2oqea3 not modelled 99.9 23 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 23 d1w2za2 not modelled 99.9 24 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 24 d1w6ga2 not modelled 99.8 23 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 25 d1w7ca2 not modelled 99.4 19 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 26 d1d6za4 not modelled 98.7 100 Fold:N domain of copper amine oxidase-like Superfamily:Copper amine oxidase, domain N Family:Copper amine oxidase, domain N 27 c3mlhA_ not modelled 40.0 21 PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the 2009 h1n1 influenza virus hemagglutinin2 receptor-binding domain 28 d2viua_ not modelled 38.5 24 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 29 d1kx5d_ not modelled 36.4 24 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 30 d1eqzb_ not modelled 34.7 22 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 31 c3qqiB_ not modelled 32.0 30 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the ha1 receptor binding domain of h22 hemagglutinin 32 d1rvxa_ not modelled 30.7 28 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 33 d1s32d_ not modelled 30.0 24 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 34 c3imoC_ not modelled 29.7 26 PDB header:unknown function Chain: C: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass14 35 d1rv0h_ not modelled 28.5 21 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 36 d1w7ca3 not modelled 28.1 16 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 37 c1ha0A_ not modelled 27.9 24 PDB header:viral protein Chain: A: PDB Molecule:protein (hemagglutinin precursor); PDBTitle: hemagglutinin precursor ha0 38 d2dira1 not modelled 26.7 22 Fold:THUMP domain Superfamily:THUMP domain-like Family:Minimal THUMP 39 c1x9yD_ not modelled 23.3 12 PDB header:hydrolase Chain: D: PDB Molecule:cysteine proteinase; PDBTitle: the prostaphopain b structure 40 d1uwwa_ not modelled 21.9 17 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 28 carbohydrate binding module, CBM28 41 d1mqma_ not modelled 21.2 24 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 42 d1jsda_ not modelled 21.0 23 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 43 d2cx1a2 not modelled 20.3 20 Fold:Cystatin-like Superfamily:Pre-PUA domain Family:Hypothetical protein APE0525, N-terminal domain 44 c2jssA_ not modelled 20.1 23 PDB header:chaperone/nuclear protein Chain: A: PDB Molecule:chimera of histone h2b.1 and histone h2a.z; PDBTitle: nmr structure of chaperone chz1 complexed with histone2 h2a.z-h2b 45 d1rd8a_ not modelled 20.0 23 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 46 c2cfoA_ not modelled 19.5 35 PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: non-discriminating glutamyl-trna synthetase from2 thermosynechococcus elongatus in complex with glu 47 d2plga1 not modelled 17.6 39 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Tll0839-like 48 c3al0C_ not modelled 16.8 27 PDB header:ligase/rna Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit c, glutamyl- PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state. 49 d2visc_ not modelled 16.0 23 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 50 d1nkqa_ not modelled 16.0 40 Fold:FAH Superfamily:FAH Family:FAH 51 d1jsma_ not modelled 12.9 30 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 52 c2rfuA_ not modelled 12.8 24 PDB header:viral protein Chain: A: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin in complex with2 lstc receptor analog 53 c3rurB_ not modelled 12.8 19 PDB header:metal transport Chain: B: PDB Molecule:iron-regulated surface determinant protein b; PDBTitle: staphylococcus aureus heme-bound selenomethionine-labeled isdb-n2 54 d1jp4a_ not modelled 12.6 31 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 55 c1zxuA_ not modelled 12.1 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:at5g01750 protein; PDBTitle: x-ray structure of protein from arabidopsis thaliana2 at5g01750 56 d2q4ma1 not modelled 12.1 7 Fold:Tubby C-terminal domain-like Superfamily:Tubby C-terminal domain-like Family:At5g01750-like 57 d1pfsa_ not modelled 10.2 50 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Phage ssDNA-binding proteins 58 c2ka6B_ not modelled 9.8 19 PDB header:transcription regulator Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: nmr structure of the cbp-taz2/stat1-tad complex 59 d1r5ya_ not modelled 9.6 4 Fold:TIM beta/alpha-barrel Superfamily:tRNA-guanine transglycosylase Family:tRNA-guanine transglycosylase 60 c3k1tA_ not modelled 9.5 55 PDB header:ligase Chain: A: PDB Molecule:glutamate--cysteine ligase gsha; PDBTitle: crystal structure of putative gamma-glutamylcysteine synthetase2 (yp_546622.1) from methylobacillus flagellatus kt at 1.90 a3 resolution 61 c2ja2A_ not modelled 9.4 33 PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase 62 c3acgA_ not modelled 9.3 23 PDB header:hydrolase Chain: A: PDB Molecule:beta-1,4-endoglucanase; PDBTitle: crystal structure of carbohydrate-binding module family 282 from clostridium josui cel5a in complex with cellobiose 63 d2d9ra1 not modelled 9.3 8 Fold:Double-split beta-barrel Superfamily:AF2212/PG0164-like Family:PG0164-like 64 d1xxxa1 not modelled 9.2 25 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 65 c3bbnI_ not modelled 9.2 26 PDB header:ribosome Chain: I: PDB Molecule:ribosomal protein s9; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 66 d2vqei1 not modelled 9.0 42 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 67 d2cs7a1 not modelled 8.9 35 Fold:IL8-like Superfamily:PhtA domain-like Family:PhtA domain-like 68 d2ibxa1 not modelled 8.8 29 Fold:Viral protein domain Superfamily:Viral protein domain Family:Influenza hemagglutinin headpiece 69 c2xfyA_ not modelled 8.8 52 PDB header:hydrolase Chain: A: PDB Molecule:beta-amylase; PDBTitle: crystal structure of barley beta-amylase complexed with2 alpha-cyclodextrin 70 d1hcza1 not modelled 8.7 22 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Cytochrome f, large domain Family:Cytochrome f, large domain 71 c3cu4A_ not modelled 8.6 16 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c family protein; PDBTitle: omcf, outer membrance cytochrome f from geobacter2 sulfurreducens 72 d2o8ra4 not modelled 8.6 7 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 73 c1fllA_ not modelled 8.5 17 PDB header:apoptosis Chain: A: PDB Molecule:tnf receptor associated factor 3; PDBTitle: molecular basis for cd40 signaling mediated by traf3 74 d1jjcb4 not modelled 8.4 4 Fold:Ferredoxin-like Superfamily:Anticodon-binding domain of PheRS Family:Anticodon-binding domain of PheRS 75 d2dy1a4 not modelled 8.4 26 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V 76 c3gr0D_ not modelled 8.2 14 PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) 77 c1zljE_ not modelled 8.1 28 PDB header:transcription Chain: E: PDB Molecule:dormancy survival regulator; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic2 response regulator dosr c-terminal domain 78 d1ejxb_ not modelled 8.1 27 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 79 c2yxgD_ not modelled 8.1 20 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) 80 c1g59A_ not modelled 8.1 45 PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: glutamyl-trna synthetase complexed with trna(glu). 81 c3afhA_ not modelled 8.0 27 PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase 2; PDBTitle: crystal structure of thermotoga maritima nondiscriminating glutamyl-2 trna synthetase in complex with a glutamyl-amp analog 82 c3iz6I_ not modelled 7.8 42 PDB header:ribosome Chain: I: PDB Molecule:40s ribosomal protein s16 (s9p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 83 c3sbrF_ not modelled 7.6 8 PDB header:oxidoreductase Chain: F: PDB Molecule:nitrous-oxide reductase; PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate 84 c2xzmI_ not modelled 7.6 42 PDB header:ribosome Chain: I: PDB Molecule:rps16e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 85 d2oo3a1 not modelled 7.6 7 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:LPG1296-like 86 d2gy9i1 not modelled 7.5 37 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 87 c3si9B_ not modelled 7.5 20 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae 88 c3luzA_ not modelled 7.5 38 PDB header:hydrolase Chain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement 89 d1owxa_ not modelled 7.5 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 90 c1y4hA_ not modelled 7.4 12 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:cysteine protease; PDBTitle: wild type staphopain-staphostatin complex 91 c2ehhE_ not modelled 7.4 20 PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus 92 c3pueA_ not modelled 7.4 20 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution 93 d1a6ca1 not modelled 7.3 29 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 94 c1kzzA_ not modelled 7.3 16 PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor associated factor 3; PDBTitle: downstream regulator tank binds to the cd40 recognition2 site on traf3 95 c2vc6A_ not modelled 7.3 10 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound 96 c3fluD_ not modelled 7.2 32 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis 97 d1xi6a_ not modelled 6.9 38 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 98 d1lbva_ not modelled 6.9 38 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 99 d1w0pa2 not modelled 6.9 12 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Vibrio cholerae sialidase, N-terminal and insertion domains