Fold library entry viewer: c1d6uB_

Added to library: Tue Mar 16 13:08:56 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	V	P	M	D	K	T	L	K	E	F	G	A	D	V	Q	W	D	D	Y	A	Q	L	F	T	L	I	K	D	G	A	Y	V	K	V	K	P	G	A	Q	T	A	I	V	N	G	Q	P	L	A	L	Q	V	P	V	V	M	K	D	N	K	A	W	V	S	D	T	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T							T	T	T	T							T	T							T	T		S					T	T						S	S						T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	V	F	Q	S	G	L	D	Q	T	F	Q	V	E	K	R	P	H	P	L	N	A	L	T	A	D	E	I	K	Q	A	V	E	I	V	K	A	S	A	D	F	K	P	N	T	R	F	T	E	I	S	L	L	P	P	D	K	E	A	V	W	A	F	A	L	E	N	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S	S			S					S	S			T	T																T	T	S	T	T			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	Q	P	R	K	A	D	V	I	M	L	D	G	K	H	I	I	E	A	V	V	D	L	Q	N	N	K	L	L	S	W	Q	P	I	K	D	A	H	G	M	V	L	L	D	D	F	A	S	V	Q	N	I	I	N	N	S	E	E	F	A	A	A	V	K	K	R	G	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											T	T									T	T	T	T									T	T																			T										T	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	A	K	K	V	I	T	T	P	L	T	V	G	Y	F	D	G	K	D	G	L	K	Q	D	A	R	L	L	K	V	I	S	Y	L	D	V	G	D	G	N	Y	W	A	H	P	I	E	N	L	V	A	V	V	D	L	E	Q	K	K	I	V	K	I	E	E	G	P	V	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G												T	T	T	T				T	T	S												S	S	S		G	G	G	S											T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	P	M	T	A	R	P	F	D	G	R	D	R	V	A	P	A	V	K	P	M	Q	I	I	E	P	E	G	K	N	Y	T	I	T	G	D	M	I	H	W	R	N	W	D	F	H	L	S	M	N	S	R	V	G	P	M	I	S	T	V	T	Y	N	D	N	G	T	K	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S	S	S	T	T	S													T	T			S					T	T					T	T									T	T	T												T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	M	Y	E	G	S	L	G	G	M	I	V	P	Y	G	D	P	D	I	G	W	Y	F	K	A	Y	L	D	S	G	D	Y	G	M	G	T	L	T	S	P	I	A	R	G	K	D	A	P	S	N	A	V	L	L	N	E	T	I	A	D	Y	T	G	V	P	M	E	I	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														B				S	T	T	T	T	T											T	T	T	T	B					T	T	T	T	S		T	T											T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	I	A	V	F	E	R	Y	A	G	P	E	Y	K	H	Q	E	M	G	Q	P	N	V	S	T	E	R	R	E	L	V	V	R	W	I	S	T	V	G	N	D	Y	I	F	D	W	I	F	H	E	N	G	T	I	G	I	D	A	G	A	T	G	I	E	A	V	K	G	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S																														T	T	S																		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	K	T	M	H	D	E	T	A	K	D	D	T	R	Y	G	T	L	I	D	H	N	I	V	G	T	T	H	Q	H	I	Y	N	F	R	L	D	L	D	V	D	G	E	N	N	S	L	V	A	M	D	P	V	V	K	P	N	T	A	G	G	P	R	T	S	T	M	Q	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T	S	T	T					T	T	T						T	T																		T	T	S	S																S		S	S		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	Y	N	I	G	N	E	Q	D	A	A	Q	K	F	D	P	G	T	I	R	L	L	S	N	P	N	K	E	N	R	M	G	N	P	V	S	Y	Q	I	I	P	Y	A	G	G	T	H	P	V	A	K	G	A	Q	F	A	P	D	E	W	I	Y	H	R	L	S	F	M	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B					S	B				T	T	S												T	T	S									S		S		B	S	S		B			S			S		T	T									T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	L	W	V	T	R	Y	H	P	G	E	R	F	P	E	G	K	Y	P	N	R	S	T	H	D	T	G	L	G	Q	Y	S	K	D	N	E	S	L	D	N	T	D	A	V	V	W	M	T	T	G	T	T	H	V	A	R	A	E	E	W	P	I	M	P	T	E	W	V	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T				S	S		S			T	T		S	S			S						T	T			B		S	S																	G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Sequence	L	L	K	P	W	N	F	F	D	E	T	P	T	L	G	A	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S	S		T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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