Fold library entry viewer: c2pncB_

Added to library: Tue Mar 16 12:14:43 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	F	A	D	L	S	R	E	E	L	T	T	V	M	S	F	L	T	Q	Q	L	G	P	D	L	V	D	A	A	Q	A	R	P	S	D	N	C	V	F	S	V	E	L	Q	L	P	P	K	A	A	A	L	A	H	L	D	R	G	S	P	P	P	A	R	E	A	L	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																				S	S			B		G	G	G			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	F	F	G	G	Q	P	Q	P	N	V	T	E	L	V	V	G	P	L	P	Q	P	S	Y	M	R	D	V	T	V	E	R	H	G	G	P	L	P	Y	Y	R	R	P	V	L	L	R	E	Y	L	D	I	D	Q	M	I	F	N	R	E	L	P	Q	A	A	G	V	L	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S										S	T	T	S													S	S				T	T	S	S																		T	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	C	S	Y	K	Q	G	G	Q	K	L	L	T	M	N	S	A	P	R	G	V	Q	S	G	D	R	S	T	W	F	G	I	Y	Y	N	I	T	K	G	G	P	Y	L	H	P	V	G	L	E	L	L	V	D	H	K	A	L	D	P	A	D	W	T	V	Q	K	V	F	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S										S	S		S	S	S	T	T														S	S		S	T	T													S	S	S	G	G	G									T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	R	Y	Y	E	N	L	A	Q	L	E	E	Q	F	E	A	G	Q	V	N	V	V	V	I	P	D	R	F	S	V	Q	G	N	R	V	A	S	S	L	W	T	F	S	F	G	L	G	A	F	S	G	P	R	V	F	D	V	R	F	Q	G	E	R	L	A	Y	E	I	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S											T	T		S													T	T					S	S									T	T	T										T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	E	A	G	A	V	Y	G	G	N	T	P	A	A	M	L	T	R	Y	M	D	S	G	F	G	M	G	Y	F	A	T	P	L	I	R	G	V	D	C	P	Y	L	A	T	Y	M	D	W	H	F	V	V	E	S	Q	T	P	K	T	L	H	D	A	F	C	V	F	E	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S										G	G	G	T		T	T	T	T						B	T	T	T	B		T	T											S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	G	L	P	L	R	R	G	G	V	A	Q	T	V	L	V	F	R	S	V	S	T	M	L	N	D	Y	V	W	D	M	V	F	Y	P	N	G	A	I	E	V	K	L	H	A	T	G	Y	I	S	S	A	F	L	F	G	A	A	R	R	Y	G	N	Q	V	G	E	H	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																		S												T	T	S										B									S	S	G	G	G	G						T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	P	V	H	T	H	S	A	H	Y	K	V	D	L	D	V	G	G	L	E	N	W	V	W	A	E	D	M	A	F	V	P	T	A	I	P	W	S	P	E	H	Q	I	Q	R	L	Q	V	T	R	K	Q	L	E	T	E	E	Q	A	A	F	P	L	G	G	A	S	P	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	S	S																	T	T																		B	G	G	G	G				T	T	S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	Y	L	A	S	K	Q	S	N	K	W	G	H	P	R	G	Y	R	I	Q	T	V	S	F	A	G	G	P	M	P	Q	N	S	P	M	E	R	A	F	S	W	G	R	Y	Q	L	A	I	T	Q	R	K	E	T	E	P	S	S	S	S	V	F	N	Q	N	D	P	W	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S																			T	T	S	T	T	G	G	G	G	G	G	G	G										T	T				S	S		T	T	S	T	T			S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Sequence	T	V	D	F	S	D	F	I	N	N	E	T	I	A	G	K	D	L	V	A	W	V	T	A	G	F	L	H	I	P	H	A	E	D	I	P	N	T	V	T	V	G	N	G	V	G	F	F	L	R	P	Y	N	F	F	D	Q	E	P	S	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			G	G	G	G		S	S		B		S	S																	G	G	G	S	S		B				S											S	S	S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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