Fold library entry viewer: c1ekmC_

Added to library: Tue Mar 16 12:38:44 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	A	R	P	A	H	P	L	D	P	L	S	T	A	E	I	K	A	A	T	N	T	V	K	S	Y	F	A	G	K	K	I	S	F	N	T	V	T	L	R	E	P	A	R	K	A	Y	I	Q	W	K	E	Q	G	G	P	L	P	P	R	L	A	Y	Y	V	I	L	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	T	T	S																		T	T	T																								S																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	P	G	V	K	E	G	L	V	D	L	A	S	L	S	V	I	E	T	R	A	L	E	T	V	Q	P	I	L	T	V	E	D	L	C	S	T	E	E	V	I	R	N	D	P	A	V	I	E	Q	C	V	L	S	G	I	P	A	N	E	M	H	K	V	Y	C	D	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S								T	T	T	T									T	T											T	T							T											T	T			G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	I	G	Y	D	E	R	W	G	T	G	K	R	L	Q	Q	A	L	V	Y	Y	R	S	D	E	D	D	S	Q	Y	S	H	P	L	D	F	C	P	I	V	D	T	E	E	K	K	V	I	F	I	D	I	P	N	R	R	R	K	V	S	K	H	K	H	A	N	F	Y	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T	S	S											S	S	T	T	S		G	G	G		B		S							T	T	T	T									S	S							S						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	M	I	E	K	V	G	A	M	R	P	E	A	P	P	I	N	V	T	Q	P	E	G	V	S	F	K	M	T	G	N	V	M	E	W	S	N	F	K	F	H	I	G	F	N	Y	R	E	G	I	V	L	S	D	V	S	Y	N	D	H	G	N	V	R	P	I	F	H	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S													T	T			S					T	T					T	T									T	T	T												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	L	S	E	M	I	V	P	Y	G	S	P	E	F	P	H	Q	R	K	H	A	L	D	I	G	E	Y	G	A	G	Y	M	T	N	P	L	S	L	G	C	D	C	K	G	V	I	H	Y	L	D	A	H	F	S	D	R	A	G	D	P	I	T	V	K	N	A	V	C	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B				S	T	T	G	G	G									T		T	T	T	T	B				T	T	T	T		S		S	S											T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	E	D	D	G	L	L	F	K	H	S	D	F	R	D	N	F	A	T	S	L	V	T	R	A	T	K	L	V	V	S	Q	I	F	T	A	A	N	Y	E	Y	C	L	Y	W	V	F	M	Q	D	G	A	I	R	L	D	I	R	L	T	G	I	L	N	T	Y	I	L	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G	T	T																				T	T											T	T	S																			T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	E	E	A	G	P	W	G	T	R	V	Y	P	N	V	N	A	H	N	H	Q	H	L	F	S	L	R	I	D	P	R	I	D	G	D	G	N	S	A	A	A	C	D	A	K	S	S	P	Y	P	L	G	S	P	E	N	M	Y	G	N	A	F	Y	S	E	K	T	T	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				T	T	T						T	T																		T	T	S	S		B											S	S		T	T	S	G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	K	D	S	L	T	N	Y	E	S	A	T	G	R	S	W	D	I	F	N	P	N	K	V	N	P	Y	S	G	K	P	P	S	Y	K	L	V	S	T	Q	C	P	P	L	L	A	K	E	G	S	L	V	A	K	R	A	P	W	A	S	H	S	V	N	V	V	P	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						B				G	G	G	T								T	T				T	T	T		S																S		T	T	S							G	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	N	R	L	Y	P	S	G	D	H	V	P	Q	W	S	G	D	G	V	R	G	M	R	E	W	I	G	D	G	S	E	N	I	D	N	T	D	I	L	F	F	H	T	F	G	I	T	H	F	P	A	P	E	D	F	P	L	M	P	A	E	P	I	T	L	M	L	R	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				T	T		S	S		T	T			S		S	S								T	T	S		S	B		S	S	B																G	G	G		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Sequence	H	F	F	T	E	N	P	G	L	D	I	Q	P	S	Y	A	M	T	T	S	E	A	K	R	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S		T	T	T	T	S			S											T

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PDB structure

FASTA sequence

Hidden Markov model

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