Fold library entry viewer: c3pgbA_

Added to library: Sat Jul 16 09:33:37 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	P	C	Q	I	T	P	P	Q	E	I	K	A	P	K	E	N	V	W	Y	G	L	T	D	D	E	T	A	D	V	A	K	W	L	F	G	R	P	E	L	N	L	T	T	T	E	N	A	G	E	W	D	N	T	I	A	L	I	E	L	H	R	P	N	K	S	E	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B												S	S			S	S	S																T		T	T	T					T	T	T			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Y	L	D	G	A	P	T	R	H	A	H	V	R	L	N	N	R	A	T	T	D	P	Y	F	A	D	I	L	V	G	P	L	P	V	S	N	A	T	T	W	E	P	L	E	F	P	Y	T	R	K	T	Q	G	Q	V	R	N	V	E	P	D	G	E	T	V	Y	S	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S	S	S										S	S	S		S	T	T								T	T		S	S		S	T	T					S				T	T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	F	K	I	S	A	S	I	A	D	I	T	L	D	L	W	N	G	T	A	L	G	L	E	N	D	T	L	D	I	W	G	I	D	P	L	W	Q	D	D	G	R	I	I	R	W	D	M	F	W	N	M	A	D	D	E	F	D	S	E	T	L	L	P	L	G	L	Y	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T									S				S	S	S	T	T									S	S		B		S	T	T														T	T				G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	D	V	T	G	R	D	P	S	Q	W	K	L	L	G	W	M	Y	N	D	I	F	Y	E	T	T	E	E	F	R	K	A	Y	W	S	P	G	F	V	K	L	K	P	N	V	D	G	A	W	A	H	T	E	Q	R	G	P	V	P	P	Q	D	R	K	Q	P	P	V	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		G	G	G									T	T				S	S									T	S	T	T											G	G	G			S			S				T	T	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	P	D	G	A	R	Y	S	V	D	A	E	R	K	Y	V	T	W	M	D	F	S	F	Y	I	A	F	N	R	D	T	G	L	S	L	F	D	I	K	Y	K	G	Q	R	V	L	Y	E	L	G	L	Q	E	A	L	A	H	Y	A	A	N	D	P	V	Q	S	S	V	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				S				T	T	T	T					T	T									T	T	T										T	T																			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	D	S	Y	Y	G	F	G	P	Y	A	F	E	L	L	K	G	Y	D	C	P	S	Y	A	S	Y	L	N	T	S	F	Y	K	D	E	E	T	H	T	H	V	D	S	L	C	L	F	E	F	D	A	D	Y	P	M	A	R	H	S	T	S	E	F	V	S	V	T	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T		S	G	G	G						B	T	T	T	B		T	T											T	T																	S	S		S						S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	F	T	L	R	S	V	S	T	I	G	N	D	Y	M	F	S	Y	N	F	H	M	D	G	T	I	G	V	E	V	R	A	S	G	Y	I	Q	S	A	Y	Y	A	N	N	Q	D	F	G	Y	Q	I	H	D	S	L	S	G	S	M	H	D	H	V	L	N	F	K	A	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	S										B								T	T		G	G	G						T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	I	L	G	P	N	N	T	I	E	L	V	S	V	V	P	V	T	K	Q	F	S	W	S	G	N	K	T	R	N	T	M	Q	L	G	R	S	F	I	H	S	E	D	E	A	R	L	N	W	G	F	N	G	Q	T	Q	L	H	V	V	N	Q	D	K	P	N	K	F	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S																	T	T	T	T	T															B	G	G	G							G	G	G														T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	R	G	Y	R	I	L	P	S	A	G	T	A	H	L	T	V	L	N	S	S	N	L	V	H	A	A	H	W	A	E	Y	D	V	Q	V	T	R	Q	H	D	F	E	P	T	S	A	H	P	Y	N	S	Q	D	I	H	N	P	P	V	D	F	S	T	F	F	N	G	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S								S	S		T	T	T	T	T	T	T	G	G	G	G		S								T	T				S			T	T	G	G	G		T	T	S		S			G	G	G	G		S			B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	N	Q	T	D	L	V	V	W	L	N	L	G	M	H	H	V	P	H	T	G	D	L	P	N	T	V	F	T	T	A	H	S	G	V	A	F	T	P	L	N	Y	L	P	G	D	P	S	R	E	T	V	N	M	V	R	V	D	Y	S	D	G	A	A	T	A	V	R	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																	G	G	G	S	S		B		T	T	T	S										S		S	S	S		G	G	G	G		S									T	T								T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Sequence	G	Q	S	N	E	T	C	S	V	V	L	Q	P	V	E	N	E	L	W	S	Y	Q	G	D	V	V	V	R	K	F	P	Y	D	P	N	D	P	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							B						T					T	T										T	T

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PDB structure

FASTA sequence

Hidden Markov model

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