Fold library entry viewer: d1jsma_

Added to library: Tue Mar 16 12:39:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	Q	I	C	I	G	Y	H	A	N	N	S	T	E	Q	V	D	T	I	M	E	K	N	V	T	V	T	H	A	Q	D	I	L	E	K	T	H	N	G	K	L	C	D	L	N	G	V	K	P	L	I	L	R	D	C	S	V	A	G	W	L	L	G	N	P	M	C	D	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S		S				B	S												S	S					T	T	B						T	T	B								T		G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	V	P	E	W	S	Y	I	V	E	K	D	N	P	V	N	G	L	C	Y	P	E	N	F	N	D	Y	E	E	L	K	H	L	L	S	S	T	N	H	F	E	K	I	R	I	I	P	R	S	S	W	S	N	H	D	A	S	S	G	V	S	S	A	C	P	Y	N	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					S						S	S		S	B	S		S	S					T	T									T	T		S							S	S		G	G	G		T	T	S	B	S	S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	F	F	R	N	V	V	W	L	I	K	K	N	N	A	Y	P	T	I	K	R	S	Y	N	N	T	N	Q	E	D	L	L	I	L	W	G	I	H	H	P	N	D	A	A	E	Q	T	K	L	Y	Q	N	P	T	T	Y	V	S	V	G	T	S	T	L	N	Q	R	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					B		B	T	T	B												S	S	S												S	S									S		S	S								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	E	I	A	T	R	P	K	V	N	G	Q	S	G	R	M	E	F	F	W	T	I	L	K	P	N	D	A	I	N	F	E	S	N	G	N	F	I	A	P	E	Y	A	Y	K	I	V	K	K	G	G	S	A	I	M	K	S	G	L	E	Y	G	N	C	N	T	K	C	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	T	T	B	S	S											T	T								S	S						S																	S									S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Sequence	P	M	G	A	I	N	S	S	M	P	F	H	N	I	H	P	L	T	I	G	E	C	P	K	Y	V	K	S	G	R	L	V	L	A	T	G	L	R	N	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S				S		S					S								S							S		B

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PDB structure

FASTA sequence

Hidden Markov model

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