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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3afhA_

Fold library idPDB HeaderMoleculeTitle
c3afhA_PDB header: ligaseChain: A: PDB Molecule: glutamyl-trna synthetase 2;PDBTitle: crystal structure of thermotoga maritima nondiscriminating glutamyl-2 trna synthetase in complex with a glutamyl-amp analog


Added to library: Sat Aug 28 21:57:38 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LVRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEG
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Known secondary structure (DSSP)





SSS
BT

B



TTT

TT


SBB
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFTTYEYPHEYKEKGHPVTIKFKVL
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Known secondary structure (DSSP) TTTB
TT


BGGG
TTS
SSSTTSSS

TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence PGKTSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEA
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Known secondary structure (DSSP) SSTTTGGGS


TTS
B
TT
SGGGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSF
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Known secondary structure (DSSP) T






TTSSB

TTTS

BT

TT


SS
S


GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTL
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Known secondary structure (DSSP)
GGGS
SS


S
T






TTS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SQLYDIMYPFMNDDYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLASKKV
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Known secondary structure (DSSP)
S




TTTSTTT
S

STTSS
 .........430.........440.........450.........460...
Sequence VFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERTLQFLKK
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Known secondary structure (DSSP) S
SS
S

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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