Email l.a.kelley@imperial.ac.uk Description P0A7L0 Date Thu Jan 5 11:05:50 GMT 2012 Unique Job ID 943e13eef36de13b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3qoyA_ 100.0 45 PDB header:ribosomal protein Chain: A: PDB Molecule:50s ribosomal protein l1; PDBTitle: crystal structure of ribosomal protein l1 from aquifex aeolicus 2 d1ad2a_ 100.0 50 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1 3 c3bboD_ 100.0 45 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein l1; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 4 c2gyc2_ 100.0 100 PDB header:ribosome Chain: 2: PDB Molecule:50s ribosomal protein l1; PDBTitle: structure of the 50s subunit of a secm-stalled e. coli2 ribosome complex obtained by fitting atomic models for rna3 and protein components into cryo-em map emd-1143 5 d1mzpa_ 100.0 26 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1 6 d1dwua_ 100.0 29 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1 7 d1i2aa_ 100.0 29 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1 8 c2zkr5_ 100.0 31 PDB header:ribosomal protein/rna Chain: 5: PDB Molecule:60s ribosomal protein l10a; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 9 c1s1iA_ 100.0 18 PDB header:ribosome Chain: A: PDB Molecule:60s ribosomal protein l1; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 10 c3iz5A_ 100.0 22 PDB header:ribosome Chain: A: PDB Molecule:60s ribosomal protein l1 (l1p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 11 c2ftcA_ 100.0 20 PDB header:ribosome Chain: A: PDB Molecule:mitochondrial ribosomal protein l1; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 12 d2j01c1 100.0 49 Fold:Ribosomal protein L1 Superfamily:Ribosomal protein L1 Family:Ribosomal protein L1 13 c2ov7C_ 100.0 59 PDB header:ribosomal protein Chain: C: PDB Molecule:50s ribosomal protein l1; PDBTitle: the first domain of the ribosomal protein l1 from thermus2 thermophilus 14 c2kzhA_ 57.6 37 PDB header:isomerase Chain: A: PDB Molecule:tryptophan biosynthesis protein trpcf; PDBTitle: three-dimensional structure of a truncated phosphoribosylanthranilate2 isomerase (residues 255-384) from escherichia coli 15 d1piia1 56.9 40 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 16 d1v5xa_ 48.6 33 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 17 d1nsja_ 43.2 29 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 18 d2i4ra1 42.7 18 Fold:AtpF-like Superfamily:AtpF-like Family:AtpF-like 19 c1piiA_ 42.2 38 PDB header:bifunctional(isomerase and synthase) Chain: A: PDB Molecule:n-(5'phosphoribosyl)anthranilate isomerase; PDBTitle: three-dimensional structure of the bifunctional enzyme2 phosphoribosylanthranilate isomerase:3 indoleglycerolphosphate synthase from escherichia coli4 refined at 2.0 angstroms resolution 20 c2w40C_ 37.5 22 PDB header:transferase Chain: C: PDB Molecule:glycerol kinase, putative; PDBTitle: crystal structure of plasmodium falciparum glycerol kinase2 with bound glycerol 21 c3nbmA_ not modelled 33.2 15 PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae. 22 d1qapa1 not modelled 25.6 24 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 23 c2ov6A_ not modelled 22.1 11 PDB header:hydrolase Chain: A: PDB Molecule:v-type atp synthase subunit f; PDBTitle: the nmr structure of subunit f of the methanogenic a1ao atp synthase2 and its interaction with the nucleotide-binding subunit b 24 d1o4ua1 not modelled 21.5 25 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 25 c2nqqA_ not modelled 21.1 28 PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea; PDBTitle: moea r137q 26 c2vqpA_ not modelled 19.6 31 PDB header:viral protein Chain: A: PDB Molecule:matrix protein; PDBTitle: structure of the matrix protein from human respiratory2 syncytial virus 27 c3hz6A_ not modelled 19.2 13 PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum 28 c2l2qA_ not modelled 18.7 17 PDB header:transferase Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela); PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi 29 c2vhmI_ not modelled 16.8 12 PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l11; PDBTitle: structure of pdf binding helix in complex with the ribosome2 (part 1 of 4) 30 c3g25B_ not modelled 16.3 21 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: 1.9 angstrom crystal structure of glycerol kinase (glpk) from2 staphylococcus aureus in complex with glycerol. 31 c3gbtA_ not modelled 16.0 16 PDB header:transferase Chain: A: PDB Molecule:gluconate kinase; PDBTitle: crystal structure of gluconate kinase from lactobacillus acidophilus 32 c1xupO_ not modelled 15.4 15 PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: enterococcus casseliflavus glycerol kinase complexed with glycerol 33 c2d4wA_ not modelled 13.3 17 PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 34 c2dpnB_ not modelled 13.1 15 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the glycerol kinase from thermus2 thermophilus hb8 35 c2nlxA_ not modelled 12.8 17 PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: crystal structure of the apo e. coli xylulose kinase 36 c3flcX_ not modelled 12.7 15 PDB header:transferase Chain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol 37 d2azeb1 not modelled 12.5 20 Fold:E2F-DP heterodimerization region Superfamily:E2F-DP heterodimerization region Family:E2F dimerization segment 38 c2zf5O_ not modelled 12.0 8 PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon 39 d1qpoa1 not modelled 11.6 15 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 40 c3ifrB_ not modelled 11.3 21 PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum 41 c2ftcG_ not modelled 10.5 39 PDB header:ribosome Chain: G: PDB Molecule:39s ribosomal protein l11, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 42 c3bboK_ not modelled 10.2 15 PDB header:ribosome Chain: K: PDB Molecule:ribosomal protein l11; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 43 d1k1ga_ not modelled 10.0 33 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 44 d1iiba_ not modelled 9.9 14 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Lactose/Cellobiose specific IIB subunit 45 d2p3ra1 not modelled 9.9 15 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glycerol kinase 46 d2nqra3 not modelled 9.5 28 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 47 c3jvpA_ not modelled 9.4 16 PDB header:transferase Chain: A: PDB Molecule:ribulokinase; PDBTitle: crystal structure of ribulokinase from bacillus halodurans 48 c3iz5J_ not modelled 9.1 43 PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l12 (l11p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 49 c3enpA_ not modelled 8.7 18 PDB header:hydrolase Chain: A: PDB Molecule:tp53rk-binding protein; PDBTitle: crystal structure of human cgi121 50 d3cjsb1 not modelled 8.2 36 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 51 c3cjtP_ not modelled 7.9 36 PDB header:transferase/ribosomal protein Chain: P: PDB Molecule:50s ribosomal protein l11; PDBTitle: ribosomal protein l11 methyltransferase (prma) in complex with2 dimethylated ribosomal protein l11 52 d2d00a1 not modelled 7.6 17 Fold:AtpF-like Superfamily:AtpF-like Family:AtpF-like 53 c1glbG_ not modelled 7.5 15 PDB header:phosphotransferase Chain: G: PDB Molecule:glycerol kinase; PDBTitle: structure of the regulatory complex of escherichia coli iiiglc with2 glycerol kinase 54 c2i4rA_ not modelled 7.5 16 PDB header:hydrolase Chain: A: PDB Molecule:v-type atp synthase subunit f; PDBTitle: crystal structure of the v-type atp synthase subunit f from2 archaeoglobus fulgidus. nesg target gr52a. 55 c3gg4B_ not modelled 6.9 11 PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis 56 d1r59o1 not modelled 6.9 15 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Glycerol kinase 57 d1gtea2 not modelled 6.9 10 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 58 d2bl5a1 not modelled 6.8 25 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 59 c3ezwD_ not modelled 6.7 15 PDB header:transferase Chain: D: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of a hyperactive escherichia coli glycerol kinase2 mutant gly230 --> asp obtained using microfluidic crystallization3 devices 60 d1mmsa2 not modelled 6.7 33 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 61 c1qapA_ not modelled 6.6 24 PDB header:glycosyltransferase Chain: A: PDB Molecule:quinolinic acid phosphoribosyltransferase; PDBTitle: quinolinic acid phosphoribosyltransferase with bound2 quinolinic acid 62 c3gk0H_ not modelled 6.6 39 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 63 c1o4uA_ not modelled 6.5 23 PDB header:transferase Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution 64 c2hbpA_ not modelled 6.5 13 PDB header:endocytosis, protein binding Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1; PDBTitle: solution structure of sla1 homology domain 1 65 c2b7pA_ not modelled 6.4 20 PDB header:transferase Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori 66 c3l0gD_ not modelled 6.4 7 PDB header:transferase Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution 67 c1xtzA_ not modelled 6.1 20 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase; PDBTitle: crystal structure of the s. cerevisiae d-ribose-5-phosphate isomerase:2 comparison with the archeal and bacterial enzymes 68 d2gycg2 not modelled 6.0 33 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 69 d1xbpg2 not modelled 5.8 33 Fold:Ribosomal L11/L12e N-terminal domain Superfamily:Ribosomal L11/L12e N-terminal domain Family:Ribosomal L11/L12e N-terminal domain 70 d1vjpa1 not modelled 5.7 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 71 c1jqmA_ not modelled 5.6 29 PDB header:ribosome Chain: A: PDB Molecule:50s ribosomal protein l11; PDBTitle: fitting of l11 protein and elongation factor g (ef-g) in2 the cryo-em map of e. coli 70s ribosome bound with ef-g,3 gdp and fusidic acid 72 d1qk1a2 not modelled 5.2 12 Fold:Glutamine synthetase/guanido kinase Superfamily:Glutamine synthetase/guanido kinase Family:Guanido kinase catalytic domain 73 c2jbmA_ not modelled 5.2 31 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: qprtase structure from human