PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkr5_

Fold library id	PDB Header	Molecule	Title
c2zkr5_	PDB header: ribosomal protein/rna	Chain: 5: PDB Molecule: 60s ribosomal protein l10a;	PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 13:22:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D Q E I E N A V S R A L E D A P E R N F R E T V D L A V N L R D L D L N D P S N R V D E S V V L P A G T G Q E T T I V V F A E G E T A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S S
S S
T T T T T T
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A E E V A D D V L D E D E L E E L G G D D D A A K D L A D D T D F F I A E K G L M Q D I G R Y L G T V L G P R G K M P E P L D P D D D V V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S
T T T T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V I E R M K N T V Q L R S G E R R T F H T R V G A E D M S A E N I A D N I D V I L R R L H A D L E K G P L N I D T V Y V K T T M G P A M E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S T T S
T T T
T T T S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	Q	E	I	E	N	A	V	S	R	A	L	E	D	A	P	E	R	N	F	R	E	T	V	D	L	A	V	N	L	R	D	L	D	L	N	D	P	S	N	R	V	D	E	S	V	V	L	P	A	G	T	G	Q	E	T	T	I	V	V	F	A	E	G	E	T	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											T	S				S	S											S	S			T	T	T	T	T	T									S	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	E	V	A	D	D	V	L	D	E	D	E	L	E	E	L	G	G	D	D	D	A	A	K	D	L	A	D	D	T	D	F	F	I	A	E	K	G	L	M	Q	D	I	G	R	Y	L	G	T	V	L	G	P	R	G	K	M	P	E	P	L	D	P	D	D	D	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S												T	T													S						T	T	T								T								T								S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	I	E	R	M	K	N	T	V	Q	L	R	S	G	E	R	R	T	F	H	T	R	V	G	A	E	D	M	S	A	E	N	I	A	D	N	I	D	V	I	L	R	R	L	H	A	D	L	E	K	G	P	L	N	I	D	T	V	Y	V	K	T	T	M	G	P	A	M	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T							S	S	S	S									T	T	S																		T	T	T				T	T	T									S	S	S