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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2vhmI_ | PDB header: ribosome | Chain: I: PDB Molecule: 50s ribosomal protein l11; | PDBTitle: structure of pdf binding helix in complex with the ribosome2 (part 1 of 4) |
Added to library: Tue Mar 16 12:59:20 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | K | K | V | Q | A | Y | V | K | L | Q | V | A | A | G | M | A | N | P | S | P | P | V | G | P | A | L | G | Q | Q | G | V | N | I | M | E | F | C | K | A | F | N | A | K | T | D | S | I | E | K | G | L | P | I | P | V | V | I | T | V | Y | A | D | R | S | F | T | F | V | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | B | ![]() | ![]() | S | S | S | S | S | S | S | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | K | T | P | P | A | A | V | L | L | K | K | A | A | G | I | K | S | G | S | G | K | P | N | K | D | K | V | G | K | I | S | R | A | Q | L | Q | E | I | A | Q | T | K | A | A | D | M | T | G | A | D | I | E | A | M | T | R | S | I | E | G | T | A | R | S | M | G | L | V | V | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | S | S | S | S | B | T | T | B | S | B | S | T | T | T | T | S | T | T | T | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | S | B |   | . | |||||||||||||||
Sequence | D | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) |
Download: | PDB structure | FASTA sequence |
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