Email l.a.kelley@imperial.ac.uk Description P0ACV2 Date Thu Jan 5 11:19:08 GMT 2012 Unique Job ID 8f91c18c8af71e03

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2j5bA_ 52.6 25 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol 2 c1ltxA_ 42.3 22 PDB header:transferase/protein binding Chain: A: PDB Molecule:rab geranylgeranyltransferase alpha subunit; PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid 3 c3cwcB_ 41.5 5 PDB header:transferase Chain: B: PDB Molecule:putative glycerate kinase 2; PDBTitle: crystal structure of putative glycerate kinase 2 from salmonella2 typhimurium lt2 4 c3lubE_ 36.9 17 PDB header:hydrolase Chain: E: PDB Molecule:putative creatinine amidohydrolase; PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution 5 c3no4A_ 33.5 6 PDB header:hydrolase Chain: A: PDB Molecule:creatinine amidohydrolase; PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution 6 d1hrua_ 27.3 11 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 7 d1v7za_ 26.8 10 Fold:Creatininase Superfamily:Creatininase Family:Creatininase 8 d1g9sa_ 20.5 13 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 9 c2cycB_ 20.4 14 PDB header:ligase Chain: B: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with l-tyrosine2 from pyrococcus horikoshii 10 c2penE_ 18.2 30 PDB header:chaperone Chain: E: PDB Molecule:orf134; PDBTitle: crystal structure of rbcx, crystal form i 11 c3khsB_ 18.0 13 PDB header:hydrolase Chain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase 12 d1nkta4 16.9 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 13 d1d7ya2 16.3 12 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 14 c1fcuA_ 15.5 14 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase 15 d1fcqa_ 14.7 14 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Bee venom hyaluronidase 16 d1tuwa_ 13.9 6 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Polyketide synthesis cyclase 17 d1k7ja_ 13.7 19 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 18 c2pe4A_ 13.4 16 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis 19 c1r6uB_ 13.4 19 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tryptophanyl-trna2 synthetase with cytokine activity 20 d1d8da_ 12.9 38 Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase 21 d2peqa1 not modelled 12.2 30 Fold:RbcX-like Superfamily:RbcX-like Family:RbcX-like 22 d1r6ta2 not modelled 12.0 19 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 23 d1jcua_ not modelled 12.0 22 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 24 c2quiB_ not modelled 11.9 19 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structures of human tryptophanyl-trna synthetase in2 complex with tryptophanamide and atp 25 d1pyfa_ not modelled 11.8 14 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 26 d1p3qq_ not modelled 11.4 11 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 27 c1tcvB_ not modelled 11.3 20 PDB header:transferase Chain: B: PDB Molecule:purine-nucleoside phosphorylase; PDBTitle: crystal structure of the purine nucleoside phosphorylase2 from schistosoma mansoni in complex with non-detergent3 sulfobetaine 195 and acetate 28 d1iyjb4 not modelled 11.0 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 29 c2advB_ not modelled 11.0 8 PDB header:hydrolase Chain: B: PDB Molecule:glutaryl 7- aminocephalosporanic acid acylase; PDBTitle: crystal structures of glutaryl 7-aminocephalosporanic acid acylase:2 mutational study of activation mechanism 30 d1fl2a2 not modelled 10.5 16 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 31 c2rjnA_ not modelled 10.2 11 PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis 32 d1mn3a_ not modelled 10.0 12 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 33 c2p4sA_ not modelled 9.9 9 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: structure of purine nucleoside phosphorylase from anopheles gambiae in2 complex with dadme-immh 34 d1nj8a2 not modelled 9.8 33 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 35 c2ip1A_ not modelled 9.3 15 PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure analysis of s. cerevisiae tryptophanyl trna2 synthetase 36 c2h3oA_ not modelled 9.2 23 PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices 37 d3eeqa2 not modelled 9.2 13 Fold:CbiG N-terminal domain-like Superfamily:CbiG N-terminal domain-like Family:CbiG N-terminal domain-like 38 c1xuzA_ not modelled 8.9 11 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 39 c2l7kA_ not modelled 8.3 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein cd1104.2 from clostridium difficile,2 northeast structural genomics consortium target cfr130 40 d1a9xb1 not modelled 8.3 16 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Carbamoyl phosphate synthetase, small subunit N-terminal domain Family:Carbamoyl phosphate synthetase, small subunit N-terminal domain 41 d1nj1a2 not modelled 8.2 23 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 42 d2py8a1 not modelled 8.2 14 Fold:RbcX-like Superfamily:RbcX-like Family:RbcX-like 43 c1tnoI_ not modelled 8.2 36 PDB header:transferase Chain: I: PDB Molecule:geranylgeranyltransferase type i alpha subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a kkksktkcvim peptide derived from k-3 ras4b 44 c1jzdA_ not modelled 8.1 22 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: dsbc-dsbdalpha complex 45 c3rpfB_ not modelled 8.1 18 PDB header:transferase Chain: B: PDB Molecule:molybdopterin synthase catalytic subunit; PDBTitle: protein-protein complex of subunit 1 and 2 of molybdopterin-converting2 factor from helicobacter pylori 26695 46 c2ntxB_ not modelled 8.0 16 PDB header:signaling protein Chain: B: PDB Molecule:emb cab41934.1; 47 c3g8rA_ not modelled 8.0 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 48 d1c0ma1 not modelled 7.9 6 Fold:SH3-like barrel Superfamily:DNA-binding domain of retroviral integrase Family:DNA-binding domain of retroviral integrase 49 d1gm5a4 not modelled 7.9 6 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 50 d1cv8a_ not modelled 7.9 12 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 51 c3tmgA_ not modelled 7.6 17 PDB header:transport protein Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter, PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi 52 d2pi8a1 not modelled 7.6 20 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:MLTA-like 53 d1iuqa_ not modelled 7.5 13 Fold:Glycerol-3-phosphate (1)-acyltransferase Superfamily:Glycerol-3-phosphate (1)-acyltransferase Family:Glycerol-3-phosphate (1)-acyltransferase 54 c2khzB_ not modelled 7.4 23 PDB header:nuclear protein Chain: B: PDB Molecule:c-myc-responsive protein rcl; PDBTitle: solution structure of rcl 55 d2h6fa1 not modelled 7.4 38 Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase 56 d1v4na_ not modelled 7.2 19 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 57 c2b8eB_ not modelled 7.2 23 PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain 58 d1vdca2 not modelled 7.1 14 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 59 d1mkya3 not modelled 7.1 13 Fold:Alpha-lytic protease prodomain-like Superfamily:Probable GTPase Der, C-terminal domain Family:Probable GTPase Der, C-terminal domain 60 c3ggsA_ not modelled 7.0 14 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: human purine nucleoside phosphorylase double mutant e201q,n243d2 complexed with 2-fluoro-2'-deoxyadenosine 61 c3l6gA_ not modelled 6.8 12 PDB header:glycine betaine-binding protein Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding PDBTitle: crystal structure of lactococcal opuac in its open conformation 62 c3focB_ not modelled 6.8 8 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from giardia lamblia 63 d1zj8a4 not modelled 6.7 17 Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like 64 c1t3bA_ not modelled 6.6 11 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: x-ray structure of dsbc from haemophilus influenzae 65 c1w8xP_ not modelled 6.6 43 PDB header:virus Chain: P: PDB Molecule:protein p16; PDBTitle: structural analysis of prd1 66 d1xhca2 not modelled 6.5 13 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 67 c3f6tA_ not modelled 6.4 8 PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of aspartate aminotransferase (e.c. 2.6.1.1)2 (yp_194538.1) from lactobacillus acidophilus ncfm at 2.15 a3 resolution 68 c3hv0A_ not modelled 6.4 15 PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from cryptosporidium parvum 69 d1vlia2 not modelled 6.2 20 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 70 c3s29C_ not modelled 6.2 19 PDB header:transferase Chain: C: PDB Molecule:sucrose synthase 1; PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications. 71 c2cyaA_ not modelled 6.2 19 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase from aeropyrum pernix 72 d2ocda1 not modelled 6.1 7 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 73 c3t4cD_ not modelled 6.1 12 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria 74 d1v58a1 not modelled 6.1 33 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 75 d2ae0x1 not modelled 6.0 19 Fold:Double psi beta-barrel Superfamily:Barwin-like endoglucanases Family:MLTA-like 76 d1pxva_ not modelled 5.9 11 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 77 c2omdB_ not modelled 5.7 25 PDB header:lyase Chain: B: PDB Molecule:molybdopterin-converting factor subunit 2; PDBTitle: crystal structure of molybdopterin converting factor subunit 22 (aq_2181) from aquifex aeolicus vf5 78 d2nrqa1 not modelled 5.6 14 Fold:RL5-like Superfamily:RL5-like Family:SSO1042-like 79 d1r71a_ not modelled 5.5 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:KorB DNA-binding domain-like Family:KorB DNA-binding domain-like 80 c2nzzA_ not modelled 5.5 56 PDB header:membrane protein Chain: A: PDB Molecule:penetratin conjugated gas (374-394) peptide; PDBTitle: nmr structure analysis of the penetratin conjugated gas2 (374-394) peptide 81 d1dcea1 not modelled 5.4 29 Fold:alpha-alpha superhelix Superfamily:Protein prenylyltransferase Family:Protein prenylyltransferase 82 c3jxeB_ not modelled 5.4 27 PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of pyrococcus horikoshii tryptophanyl-trna2 synthetase in complex with trpamp 83 d1tf5a4 not modelled 5.4 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 84 d1ur3m_ not modelled 5.4 12 Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP) 85 c2eqaA_ not modelled 5.4 19 PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii 86 c2ou2A_ not modelled 5.4 11 PDB header:transferase Chain: A: PDB Molecule:histone acetyltransferase htatip; PDBTitle: acetyltransferase domain of human hiv-1 tat interacting2 protein, 60kda, isoform 3 87 c3m8yC_ not modelled 5.2 14 PDB header:isomerase Chain: C: PDB Molecule:phosphopentomutase; PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation 88 d1q1ra2 not modelled 5.2 9 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 89 c3nurA_ not modelled 5.2 15 PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of a putative amidohydrolase from staphylococcus2 aureus 90 d1eeja1 not modelled 5.1 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 91 c3ihjA_ not modelled 5.1 11 PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp 92 c2pkaB_ not modelled 5.0 19 PDB header:serine proteinase Chain: B: PDB Molecule:kallikrein a; PDBTitle: refined 2 angstroms x-ray crystal structure of porcine2 pancreatic kallikrein a, a specific trypsin-like serine3 proteinase. crystallization, structure determination,4 crystallographic refinement, structure and its comparison5 with bovine trypsin