Email l.a.kelley@imperial.ac.uk Description P02942 Date Thu Jan 5 10:57:47 GMT 2012 Unique Job ID 8e298af193d1f7ee

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1qu7A_ 99.9 99 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor 2 c2ch7A_ 99.7 26 PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima 3 c3g67A_ 99.4 20 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima 4 c2d4uA_ 98.9 99 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: crystal structure of the ligand binding domain of the bacterial serine2 chemoreceptor tsr 5 d2liga_ 98.2 36 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 6 d2asra_ 97.8 35 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 7 c3lnrA_ 97.7 13 PDB header:signaling protein Chain: A: PDB Molecule:aerotaxis transducer aer2; PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2 8 d1vlta_ 97.4 36 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 9 d2asxa1 96.8 23 Fold:HAMP domain-like Superfamily:HAMP domain-like Family:HAMP domain 10 c2rm8A_ 96.4 20 PDB header:signaling protein Chain: A: PDB Molecule:sensory rhodopsin ii transducer; PDBTitle: the solution structure of phototactic transducer protein2 htrii linker region from natronomonas pharaonis 11 c1sj8A_ 94.3 11 PDB header:structural protein Chain: A: PDB Molecule:talin 1; PDBTitle: crystal structure of talin residues 482-789 12 c2wpqA_ 94.2 7 PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion) 13 c3zrwB_ 93.6 18 PDB header:signaling protein Chain: B: PDB Molecule:af1503 protein, osmolarity sensor protein envz; PDBTitle: the structure of the dimeric hamp-dhp fusion a291v mutant 14 c2kbbA_ 77.1 13 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the talin rod domain, 1655-1822 15 c3dyjA_ 75.8 8 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: crystal structure a talin rod fragment 16 c2qihA_ 73.5 12 PDB header:cell adhesion Chain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis 17 c1deqF_ 68.5 8 PDB header: PDB COMPND: 18 c3ojaB_ 68.5 9 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 19 c1ei3C_ 63.3 6 PDB header: PDB COMPND: 20 c1deqO_ 61.1 16 PDB header: PDB COMPND: 21 c3gvmA_ not modelled 56.3 14 PDB header:viral protein Chain: A: PDB Molecule:putative uncharacterized protein sag1039; PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae 22 c1ei3E_ not modelled 56.0 12 PDB header: PDB COMPND: 23 c2vs0B_ not modelled 50.2 14 PDB header:cell invasion Chain: B: PDB Molecule:virulence factor esxa; PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa 24 c1urqA_ not modelled 43.6 19 PDB header:transport protein Chain: A: PDB Molecule:m-tomosyn isoform; PDBTitle: crystal structure of neuronal q-snares in complex with2 r-snare motif of tomosyn 25 c3ipdB_ not modelled 39.1 10 PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21 26 c3b5nF_ not modelled 37.4 12 PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex 27 c2kseA_ not modelled 34.0 10 PDB header:transferase Chain: A: PDB Molecule:sensor protein qsec; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor qsec, center for structures of3 membrane proteins (csmp) target 4311c 28 c2ieqC_ not modelled 32.8 14 PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein 29 c1sfcJ_ not modelled 32.0 10 PDB header:transport protein Chain: J: PDB Molecule:protein (syntaxin 1a); PDBTitle: neuronal synaptic fusion complex 30 c1n7sB_ not modelled 30.2 11 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 1a; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 31 c3ok8A_ not modelled 29.3 8 PDB header:protein binding Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein PDBTitle: i-bar of pinkbar 32 c1i49A_ not modelled 25.3 16 PDB header:signaling protein Chain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin 33 c3hd7A_ not modelled 24.9 22 PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 34 c2npsB_ not modelled 23.5 14 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 13; PDBTitle: crystal structure of the early endosomal snare complex 35 c1sfcI_ not modelled 21.6 21 PDB header:transport protein Chain: I: PDB Molecule:protein (synaptobrevin 2); PDBTitle: neuronal synaptic fusion complex 36 c1nafA_ not modelled 21.3 15 PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain 37 d1eq1a_ not modelled 20.5 11 Fold:Apolipophorin-III Superfamily:Apolipophorin-III Family:Apolipophorin-III 38 c3b5nE_ not modelled 19.3 15 PDB header:membrane protein Chain: E: PDB Molecule:synaptobrevin homolog 1; PDBTitle: structure of the yeast plasma membrane snare complex 39 c2d4yA_ not modelled 19.2 10 PDB header:structural protein Chain: A: PDB Molecule:flagellar hook-associated protein 1; PDBTitle: crystal structure of a 49k fragment of hap1 (flgk) 40 c2bezC_ not modelled 19.2 14 PDB header:viral protein Chain: C: PDB Molecule:e2 glycoprotein; PDBTitle: structure of a proteolitically resistant core from the2 severe acute respiratory syndrome coronavirus s2 fusion3 protein 41 c1gl2A_ not modelled 18.9 13 PDB header:membrane protein Chain: A: PDB Molecule:endobrevin; PDBTitle: crystal structure of an endosomal snare core complex 42 c2npsA_ not modelled 18.0 26 PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 4; PDBTitle: crystal structure of the early endosomal snare complex 43 c1n7sA_ not modelled 15.9 22 PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 44 c3ghgK_ not modelled 15.9 9 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 45 c1zvaA_ not modelled 14.5 14 PDB header:viral protein Chain: A: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion 46 d1wa8a1 not modelled 13.6 11 Fold:Ferritin-like Superfamily:EsxAB dimer-like Family:ESAT-6 like 47 c1bf5A_ not modelled 13.4 7 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 48 d1oxza_ not modelled 13.0 14 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 49 c1oxzA_ not modelled 13.0 14 PDB header:membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain 50 d1wr6a1 not modelled 12.6 8 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 51 c1kmiZ_ not modelled 12.5 10 PDB header:signaling protein Chain: Z: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of an e.coli chemotaxis protein, chez 52 d1ez3a_ not modelled 12.3 10 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 53 c2d3eD_ not modelled 12.2 10 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 54 c2efrB_ not modelled 12.2 9 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 55 d2b0ha1 not modelled 12.0 18 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:VBS domain 56 c2l7aA_ not modelled 11.6 16 PDB header:cell adhesion Chain: A: PDB Molecule:talin-1; PDBTitle: solution structure of the talin vbs2b domain 57 c1wyyB_ not modelled 11.1 15 PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein 58 c3arcl_ not modelled 11.0 39 PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 59 d1wa8b1 not modelled 10.0 12 Fold:Ferritin-like Superfamily:EsxAB dimer-like Family:ESAT-6 like 60 d1i4da_ not modelled 9.2 16 Fold:BAR/IMD domain-like Superfamily:BAR/IMD domain-like Family:Arfaptin, Rac-binding fragment 61 c3arcL_ not modelled 9.0 39 PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 62 c3prqL_ not modelled 9.0 39 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer 63 c3prrL_ not modelled 9.0 39 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer 64 d2axtl1 not modelled 9.0 39 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein L, PsbL Family:PsbL-like 65 c1s5lL_ not modelled 9.0 39 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 66 c2axtl_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 67 c2axtL_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 68 c3bz2L_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer 69 c3a0hl_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 70 c3a0bl_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 71 c3a0bL_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 72 c3a0hL_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 73 c3kziL_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii 74 c1s5ll_ not modelled 9.0 39 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 75 c3bz1L_ not modelled 9.0 39 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer 76 c1l4aD_ not modelled 9.0 10 PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei 77 c1sfcD_ not modelled 8.7 10 PDB header:transport protein Chain: D: PDB Molecule:protein (snap-25b); PDBTitle: neuronal synaptic fusion complex 78 c3e7kF_ not modelled 8.4 17 PDB header:membrane protein Chain: F: PDB Molecule:trpm7 channel; PDBTitle: crystal structure of an antiparallel coiled-coil tetramerization2 domain from trpm7 channels 79 c2kvpA_ not modelled 8.3 16 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the talin vbs3 domain, 1815-1973 80 c3dtpA_ not modelled 8.2 15 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 81 d1x79a_ not modelled 8.1 15 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 82 c3gxvD_ not modelled 7.9 23 PDB header:hydrolase/replication Chain: D: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase 83 c2fxmB_ not modelled 7.6 5 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 84 c2npsD_ not modelled 7.6 5 PDB header:transport protein Chain: D: PDB Molecule:syntaxin-6; PDBTitle: crystal structure of the early endosomal snare complex 85 d1o3xa_ not modelled 7.6 14 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 86 c1yvlB_ not modelled 7.5 7 PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 87 c3gxvC_ not modelled 7.5 23 PDB header:hydrolase/replication Chain: C: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase 88 c1eboE_ not modelled 7.4 18 PDB header:viral protein Chain: E: PDB Molecule:ebola virus envelope protein chimera consisting PDBTitle: crystal structure of the ebola virus membrane-fusion2 subunit, gp2, from the envelope glycoprotein ectodomain 89 d1wrda1 not modelled 7.3 8 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 90 c2j7aC_ not modelled 7.2 24 PDB header:oxidoreductase Chain: C: PDB Molecule:cytochrome c quinol dehydrogenase nrfh; PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex from desulfovibrio vulgaris 91 c2l9uA_ not modelled 7.1 10 PDB header:membrane protein Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: spatial structure of dimeric erbb3 transmembrane domain 92 c1junB_ not modelled 7.1 28 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 93 d1t01a1 not modelled 7.1 12 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 94 d2h8pc1 not modelled 6.8 11 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 95 c2b9cA_ not modelled 6.8 15 PDB header:contractile protein Chain: A: PDB Molecule:striated-muscle alpha tropomyosin; PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin 96 d1r0da_ not modelled 6.8 15 Fold:I/LWEQ domain Superfamily:I/LWEQ domain Family:I/LWEQ domain 97 c1m1jA_ not modelled 6.7 5 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands 98 c2l7nA_ not modelled 6.7 9 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the b domain of talin 99 c1l7cA_ not modelled 6.7 14 PDB header:cell adhesion Chain: A: PDB Molecule:alpha e-catenin; PDBTitle: alpha-catenin fragment, residues 385-651