Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	Q	L	K	R	V	A	E	A	K	L	P	T	P	W	G	D	F	L	M	V	G	F	E	E	L	A	T	G	H	D	H	V	A	L	V	Y	G	D	I	S	G	H	T	P	V	L	A	R	V	H	S	E	C	L	T	G	D	A	L
Secondary structure
SS confidence
Disorder		?								?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		F	S	L	R	C	D	C	G	F	Q	L	E	A	A	L	T	Q	I	A	E	E	G	R	G	I	L	L	Y	H	R	Q	E	G	R	N	I	G	L	L	N	K	I	R	A	Y	A	L	Q	D	Q	G	Y	D	T	V	E	A	N	H	Q
Secondary structure
SS confidence
Disorder																																			?	?	?	?													?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		L	G	F	A	A	D	E	R	D	F	T	L	C	A	D	M	F	K	L	L	G	V	N	E	V	R	L	L	T	N	N	P	K	K	V	E	I	L	T	E	A	G	I	N	I	V	E	R	V	P	L	I	V	G	R	N	P	N	N	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Sequence		H	Y	L	D	T	K	A	E	K	M	G	H	L	L	N	K
Secondary structure
SS confidence
Disorder											?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2bz1 chain A domain 1 Region: 1 - 173 Aligned: 173 Modelled: 172 Confidence: 100.0% Identity: 98% Fold: RibA-like Superfamily: RibA-like Family: RibA-like Phyre2 PDB 1oi2 chain A Region: 21 - 143 Aligned: 88 Modelled: 91 Confidence: 88.6% Identity: 27% Fold: DAK1/DegV-like Superfamily: DAK1/DegV-like Family: DAK1 Phyre2 PDB 1ghs chain A Region: 133 - 166 Aligned: 34 Modelled: 34 Confidence: 86.3% Identity: 18% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: beta-glycanases Phyre2 PDB 1un9 chain B Region: 21 - 148 Aligned: 91 Modelled: 96 Confidence: 86.1% Identity: 27% PDB header:kinase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: crystal structure of the dihydroxyacetone kinase from c.2 freundii in complex with amp-pnp and mg2+ Phyre2 PDB 2cyg chain A domain 1 Region: 131 - 170 Aligned: 40 Modelled: 40 Confidence: 86.1% Identity: 20% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: beta-glycanases Phyre2 PDB 1aq0 chain A Region: 133 - 170 Aligned: 38 Modelled: 38 Confidence: 85.9% Identity: 32% Fold: TIM beta/alpha-barrel Superfamily: (Trans)glycosidases Family: beta-glycanases Phyre2 PDB 3f55 chain A Region: 133 - 166 Aligned: 34 Modelled: 34 Confidence: 84.4% Identity: 18% PDB header:hydrolase, allergen Chain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41) Phyre2 PDB 3ct4 chain B Region: 21 - 143 Aligned: 87 Modelled: 91 Confidence: 80.8% Identity: 29% PDB header:transferase Chain: B: PDB Molecule:pts-dependent dihydroxyacetone kinase, PDBTitle: structure of dha-kinase subunit dhak from l. lactis Phyre2 PDB 1un8 chain A domain 4 Region: 52 - 150 Aligned: 64 Modelled: 68 Confidence: 71.4% Identity: 28% Fold: DAK1/DegV-like Superfamily: DAK1/DegV-like Family: DAK1 Phyre2 PDB 1n71 chain A Region: 87 - 170 Aligned: 57 Modelled: 57 Confidence: 70.9% Identity: 21% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2iu6 chain B Region: 52 - 150 Aligned: 64 Modelled: 68 Confidence: 70.3% Identity: 22% PDB header:transferase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: regulation of the dha operon of lactococcus lactis Phyre2 PDB 1v96 chain A domain 1 Region: 122 - 167 Aligned: 42 Modelled: 46 Confidence: 70.1% Identity: 19% Fold: PIN domain-like Superfamily: PIN domain-like Family: PIN domain Phyre2 PDB 2g3a chain A domain 1 Region: 124 - 170 Aligned: 47 Modelled: 47 Confidence: 62.4% Identity: 13% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 1u6m chain A Region: 86 - 171 Aligned: 59 Modelled: 59 Confidence: 60.8% Identity: 20% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 1y9w chain A domain 1 Region: 87 - 170 Aligned: 57 Modelled: 57 Confidence: 54.3% Identity: 19% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2ree chain B Region: 121 - 182 Aligned: 62 Modelled: 62 Confidence: 47.2% Identity: 18% PDB header:transferase, lyase Chain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula Phyre2 PDB 1y82 chain A domain 1 Region: 122 - 167 Aligned: 42 Modelled: 41 Confidence: 45.4% Identity: 21% Fold: PIN domain-like Superfamily: PIN domain-like Family: PIN domain Phyre2 PDB 1y9k chain A domain 1 Region: 87 - 170 Aligned: 57 Modelled: 57 Confidence: 43.4% Identity: 18% Fold: Acyl-CoA N-acyltransferases (Nat) Superfamily: Acyl-CoA N-acyltransferases (Nat) Family: N-acetyl transferase, NAT Phyre2 PDB 2w62 chain A Region: 134 - 196 Aligned: 63 Modelled: 63 Confidence: 42.7% Identity: 22% PDB header:transferase Chain: A: PDB Molecule:glycolipid-anchored surface protein 2; PDBTitle: saccharomyces cerevisiae gas2p in complex with2 laminaripentaose Phyre2 PDB 16pk chain A Region: 42 - 150 Aligned: 92 Modelled: 107 Confidence: 41.9% Identity: 28% Fold: Phosphoglycerate kinase Superfamily: Phosphoglycerate kinase Family: Phosphoglycerate kinase Phyre2 1 d2bz1a1 2 d1oi2a_ 3 d1ghsa_ 4 c1un9B_ 5 d2cyga1 6 d1aq0a_ 7 c3f55A_ 8 c3ct4B_ 9 d1un8a4 10 d1n71a_ 11 c2iu6B_ 12 d1v96a1 13 d2g3aa1 14 d1u6ma_ 15 d1y9wa1 16 c2reeB_ 17 d1y82a1 18 d1y9ka1 19 c2w62A_ 20 d16pka_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2bz1a1 100.0 98 Fold:RibA-like Superfamily:RibA-like Family:RibA-like 2 d1oi2a_ 88.6 27 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DAK1 3 d1ghsa_ 86.3 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 4 c1un9B_ 86.1 27 PDB header:kinase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: crystal structure of the dihydroxyacetone kinase from c.2 freundii in complex with amp-pnp and mg2+ 5 d2cyga1 86.1 20 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 6 d1aq0a_ 85.9 32 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 7 c3f55A_ 84.4 18 PDB header:hydrolase, allergen Chain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41) 8 c3ct4B_ 80.8 29 PDB header:transferase Chain: B: PDB Molecule:pts-dependent dihydroxyacetone kinase, PDBTitle: structure of dha-kinase subunit dhak from l. lactis 9 d1un8a4 71.4 28 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DAK1 10 d1n71a_ 70.9 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 11 c2iu6B_ 70.3 22 PDB header:transferase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: regulation of the dha operon of lactococcus lactis 12 d1v96a1 70.1 19 Fold:PIN domain-like Superfamily:PIN domain-like Family:PIN domain 13 d2g3aa1 62.4 13 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 14 d1u6ma_ 60.8 20 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 15 d1y9wa1 54.3 19 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 16 c2reeB_ 47.2 18 PDB header:transferase, lyase Chain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula 17 d1y82a1 45.4 21 Fold:PIN domain-like Superfamily:PIN domain-like Family:PIN domain 18 d1y9ka1 43.4 18 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 19 c2w62A_ 42.7 22 PDB header:transferase Chain: A: PDB Molecule:glycolipid-anchored surface protein 2; PDBTitle: saccharomyces cerevisiae gas2p in complex with2 laminaripentaose 20 d16pka_ 41.9 28 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 21 c3dr8B_ not modelled 41.1 19 PDB header:transferase Chain: B: PDB Molecule:ynca; PDBTitle: structure of ynca, a putative acetyltransferase from salmonella2 typhimurium with its cofactor acetyl-coa 22 d1lssa_ not modelled 38.9 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 23 d1qh5a_ not modelled 38.6 21 Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Glyoxalase II (hydroxyacylglutathione hydrolase) 24 c3kc2A_ not modelled 36.4 16 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ykr070w; PDBTitle: crystal structure of mitochondrial had-like phosphatase from2 saccharomyces cerevisiae 25 c2g1uA_ not modelled 33.6 16 PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution 26 d1o8ca2 not modelled 32.5 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 27 d2cy2a1 not modelled 30.8 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 28 d2je8a5 not modelled 30.5 14 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 29 d1m65a_ not modelled 30.2 20 Fold:7-stranded beta/alpha barrel Superfamily:PHP domain-like Family:PHP domain 30 d1k7ka_ not modelled 29.5 32 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 31 d1i12a_ not modelled 29.0 13 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 32 d2fiwa1 not modelled 26.8 10 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 33 d1ltka_ not modelled 25.7 21 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 34 c3iupB_ not modelled 25.2 12 PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution 35 c3f8kA_ not modelled 24.9 19 PDB header:transferase Chain: A: PDB Molecule:protein acetyltransferase; PDBTitle: crystal structure of protein acetyltransferase (pat) from2 sulfolobus solfataricus 36 c3lodA_ not modelled 23.2 19 PDB header:transferase Chain: A: PDB Molecule:putative acyl-coa n-acyltransferase; PDBTitle: the crystal structure of the putative acyl-coa n-acyltransferase from2 klebsiella pneumoniae subsp.pneumoniae mgh 78578 37 d1vhsa_ not modelled 22.9 18 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 38 c3exnA_ not modelled 22.2 18 PDB header:transferase Chain: A: PDB Molecule:probable acetyltransferase; PDBTitle: crystal structure of acetyltransferase from thermus thermophilus hb8 39 c3d8pB_ not modelled 22.0 16 PDB header:transferase Chain: B: PDB Molecule:acetyltransferase of gnat family; PDBTitle: crystal structure of acetyltransferase of gnat family (np_373092.1)2 from staphylococcus aureus mu50 at 2.20 a resolution 40 d2fiaa1 not modelled 21.5 14 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 41 c3ecjC_ not modelled 21.3 13 PDB header:oxidoreductase Chain: C: PDB Molecule:protein (homoprotocatechuate 2,3-dioxygenase); PDBTitle: structure of e323l mutant of homoprotocatechuate 2,3-dioxygenase from2 brevibacterium fuscum at 1.65a resolution 42 c2oh1A_ not modelled 21.3 13 PDB header:transferase Chain: A: PDB Molecule:acetyltransferase, gnat family; PDBTitle: crystal structure of acetyltransferase gnat family (yp_013287.1) from2 listeria monocytogenes 4b f2365 at 1.46 a resolution 43 d1s3za_ not modelled 21.2 18 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 44 d1tiqa_ not modelled 20.9 14 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 45 c2q0yA_ not modelled 20.9 13 PDB header:transferase Chain: A: PDB Molecule:gcn5-related n-acetyltransferase; PDBTitle: crystal structure of gcn5-related n-acetyltransferase (yp_295895.1)2 from ralstonia eutropha jmp134 at 1.80 a resolution 46 c2k5tA_ not modelled 20.8 5 PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein yhhk; PDBTitle: solution nmr structure of putative n-acetyl transferase2 yhhk from e. coli bound to coenzyme a: northeast3 structural genomics consortium target et106 47 d1qpga_ not modelled 20.1 15 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 48 d1c1da1 not modelled 20.1 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 49 c3e48B_ not modelled 20.0 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of a nucleoside-diphosphate-sugar epimerase2 (sav0421) from staphylococcus aureus, northeast structural genomics3 consortium target zr319 50 d1yvoa1 not modelled 19.9 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 51 d1ghea_ not modelled 19.4 13 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 52 d1yvka1 not modelled 19.3 12 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 53 c3i9sA_ not modelled 18.6 13 PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 54 c2xecD_ not modelled 18.1 20 PDB header:isomerase Chain: D: PDB Molecule:putative maleate isomerase; PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris 55 c2jlmE_ not modelled 17.9 12 PDB header:transferase Chain: E: PDB Molecule:putative phosphinothricin n-acetyltransferase; PDBTitle: structure of a putative acetyltransferase (aciad1637) from2 acinetobacter baylyi adp1 56 d1k3ra1 not modelled 17.8 25 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Hypothetical protein MTH1 (MT0001), insert domain 57 d1kola2 not modelled 17.4 26 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 58 d1vpea_ not modelled 17.3 19 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 59 c2r1iB_ not modelled 17.1 19 PDB header:transferase Chain: B: PDB Molecule:gcn5-related n-acetyltransferase; PDBTitle: crystal structure of putative acetyltransferase (yp_831484.1) from2 arthrobacter sp. fb24 at 1.65 a resolution 60 d1bhga3 not modelled 16.3 16 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 61 d2hmva1 not modelled 16.2 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 62 c3mjdA_ not modelled 16.1 14 PDB header:transferase Chain: A: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: 1.9 angstrom crystal structure of orotate2 phosphoribosyltransferase (pyre) francisella tularensis. 63 d2b5ga1 not modelled 16.0 15 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 64 c1ib1E_ not modelled 15.7 16 PDB header:signaling protein/transferase Chain: E: PDB Molecule:serotonin n-acetyltransferase; PDBTitle: crystal structure of the 14-3-3 zeta:serotonin n-2 acetyltransferase complex 65 c2pc1A_ not modelled 15.3 28 PDB header:transferase Chain: A: PDB Molecule:acetyltransferase, gnat family; PDBTitle: crystal structure of acetyltransferase gnat family (np_688560.1) from2 streptococcus agalactiae 2603 at 1.28 a resolution 66 c2pswA_ not modelled 15.2 17 PDB header:transferase Chain: A: PDB Molecule:n-acetyltransferase 13; PDBTitle: human mak3 homolog in complex with coa 67 d1a9xa3 not modelled 15.1 15 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 68 d1hjsa_ not modelled 13.8 28 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 69 d1urha1 not modelled 13.6 13 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese) 70 d1yx0a1 not modelled 13.3 11 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 71 c3fncA_ not modelled 12.4 20 PDB header:transferase Chain: A: PDB Molecule:putative acetyltransferase; PDBTitle: crystal structure of a putative acetyltransferase from listeria2 innocua 72 c3q3vA_ not modelled 11.9 16 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni. 73 d2f06a2 not modelled 11.5 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 74 c3eywA_ not modelled 11.5 21 PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff 75 d2ef7a1 not modelled 11.2 16 Fold:CBS-domain pair Superfamily:CBS-domain pair Family:CBS-domain pair 76 d1v6sa_ not modelled 11.1 21 Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase 77 d2aeea1 not modelled 11.1 18 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 78 c3k9uA_ not modelled 10.9 21 PDB header:transferase Chain: A: PDB Molecule:paia acetyltransferase; PDBTitle: crystal structure of paia acetyltransferase (ta0374) from thermoplasma2 acidophilum 79 c3pp9B_ not modelled 10.7 14 PDB header:transferase Chain: B: PDB Molecule:putative streptothricin acetyltransferase; PDBTitle: 1.6 angstrom resolution crystal structure of putative streptothricin2 acetyltransferase from bacillus anthracis str. ames in complex with3 acetyl coenzyme a 80 d2v8qe1 not modelled 10.1 17 Fold:CBS-domain pair Superfamily:CBS-domain pair Family:CBS-domain pair 81 d1m6ia3 not modelled 9.9 40 Fold:CO dehydrogenase flavoprotein C-domain-like Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain 82 d1mk4a_ not modelled 9.8 19 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 83 c2zcuA_ not modelled 9.5 22 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized oxidoreductase ytfg; PDBTitle: crystal structure of a new type of nadph-dependent quinone2 oxidoreductase (qor2) from escherichia coli 84 d1v7ca_ not modelled 9.3 26 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 85 d2jdca1 not modelled 9.2 8 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 86 d1yr0a1 not modelled 9.0 16 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 87 d2euia1 not modelled 8.9 15 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 88 d1xrsb2 not modelled 8.8 18 Fold:Dodecin subunit-like Superfamily:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain Family:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 89 c2pdoG_ not modelled 8.4 17 PDB header:transferase Chain: G: PDB Molecule:acetyltransferase ypea; PDBTitle: crystal structure of the putative acetyltransferase of gnat family2 from shigella flexneri 90 d3bzka2 not modelled 8.3 10 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Tex HhH-containing domain-like 91 c2jtqA_ not modelled 8.3 11 PDB header:transferase Chain: A: PDB Molecule:phage shock protein e; PDBTitle: rhodanese from e.coli 92 d1o8ba2 not modelled 8.3 24 Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain 93 d1xp3a1 not modelled 8.2 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV 94 d1iyca_ not modelled 8.2 29 Fold:Invertebrate chitin-binding proteins Superfamily:Invertebrate chitin-binding proteins Family:Antifungal peptide scarabaecin 95 d1ryla_ not modelled 7.9 17 Fold:Hypothetical protein yfbM Superfamily:Hypothetical protein yfbM Family:Hypothetical protein yfbM 96 d1tt7a2 not modelled 7.9 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 97 d1tafa_ not modelled 7.8 29 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 98 c3efhB_ not modelled 7.8 19 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 99 c2yzqA_ not modelled 7.8 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ph1780; PDBTitle: crystal structure of uncharacterized conserved protein from2 pyrococcus horikoshii

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0