PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3e48B_

Fold library id	PDB Header	Molecule	Title
c3e48B_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: putative nucleoside-diphosphate-sugar epimerase;	PDBTitle: crystal structure of a nucleoside-diphosphate-sugar2 epimerase (sav0421) from staphylococcus aureus, northeast3 structural genomics consortium target zr319

Links to external resources
Added to library: Tue Mar 16 13:33:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X N I X L T G A T G H L G T H I T N Q A I A N H I D H F H I G V R N V E K V P D D W R G K V S V R Q L D Y F N Q E S X V E A F K G X D T V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S T T
S S S
G G G S
G G G B T T B
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F I P S I I H P S F K R I P E V E N L V Y A A K Q S G V A H I I F I G Y Y A D Q H N N P F H X S P Y F G Y A S R L L S T S G I D Y T Y V R X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A X Y X D P L K P Y L P E L X N X H K L I Y P A G D G R I N Y I T R N D I A R G V I A I I K N P D T W G K R Y L L S G Y S Y D X K E L A A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
T T
G G G T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L S E A S G T E I K Y E P V S L E T F A E X Y D E P K G F G A L L A S X Y H A G A R G L L D Q E S N D F K Q L V N D Q P Q T L Q S F L Q E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S T T T T T T
S S S
T T S

. . . . . . . . .

Sequence I L E H H H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	N	I	X	L	T	G	A	T	G	H	L	G	T	H	I	T	N	Q	A	I	A	N	H	I	D	H	F	H	I	G	V	R	N	V	E	K	V	P	D	D	W	R	G	K	V	S	V	R	Q	L	D	Y	F	N	Q	E	S	X	V	E	A	F	K	G	X	D	T	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S													T	T		S	S						S		G	G	G	S		G	G	G	B	T	T	B							T	T										T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	I	P	S	I	I	H	P	S	F	K	R	I	P	E	V	E	N	L	V	Y	A	A	K	Q	S	G	V	A	H	I	I	F	I	G	Y	Y	A	D	Q	H	N	N	P	F	H	X	S	P	Y	F	G	Y	A	S	R	L	L	S	T	S	G	I	D	Y	T	Y	V	R	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S					T														T										S			S	T	T				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	X	Y	X	D	P	L	K	P	Y	L	P	E	L	X	N	X	H	K	L	I	Y	P	A	G	D	G	R	I	N	Y	I	T	R	N	D	I	A	R	G	V	I	A	I	I	K	N	P	D	T	W	G	K	R	Y	L	L	S	G	Y	S	Y	D	X	K	E	L	A	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T												T							T	T																						G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	S	E	A	S	G	T	E	I	K	Y	E	P	V	S	L	E	T	F	A	E	X	Y	D	E	P	K	G	F	G	A	L	L	A	S	X	Y	H	A	G	A	R	G	L	L	D	Q	E	S	N	D	F	K	Q	L	V	N	D	Q	P	Q	T	L	Q	S	F	L	Q	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S															T	T			S	T	T														T	T	T	T					S							S	S										T	T	S
	.	.	.	.	.	.	.	.	.
Sequence	I	L	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S