PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1v7ca_

Fold library id	Fold	Superfamily	Family
d1v7ca_	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes

Links to external resources
Added to library: Tue Mar 16 13:22:01 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R P P L I E R Y R N L L P V S E K T P V I S L L E G S T P L I P L K G P E E A R K K G I R L Y A K Y E G L N P T G S F K D R G M T L A V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G S S
T T S
S
T T T G G G S T T S B T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K A V E G G A Q A V A C A S T G N T A A S A A A Y A A R A G I L A I V V L P A G Y V A L G K V A Q S L V H G A R I V Q V E G N F D D A L R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S T
T T
S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T Q K L T E A F P V A L V N S V N P H R L E G Q K T L A F E V V D E L G D A P H Y H A L P V G N A G N I T A H W M G Y K A Y H A L G K A K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S T T S T S S
S
S S S T T S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L P R M L G F Q A A G A A P L V L G R P V E R P E T L A T A I R I G N P A S W Q G A V R A K E E S G G V I E A V T D E E I L F A Y R Y L A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T S
S S
S
G G G
S S
T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E E G I F C E P A S A A A M A G V F K L L R E G R L E P E S T V V L T L T G H G L K D P A T A E R V A E L P P P V P A R L E A V A A A A G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B
T T
S
S S
B B G G G
G G G G G G T
S S T T

.

Sequence L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	P	P	L	I	E	R	Y	R	N	L	L	P	V	S	E	K	T	P	V	I	S	L	L	E	G	S	T	P	L	I	P	L	K	G	P	E	E	A	R	K	K	G	I	R	L	Y	A	K	Y	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	L	A	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	G	G	G	S	S			T	T	S					S																		T	T	T								G	G	G	S	T	T	S	B	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	V	E	G	G	A	Q	A	V	A	C	A	S	T	G	N	T	A	A	S	A	A	A	Y	A	A	R	A	G	I	L	A	I	V	V	L	P	A	G	Y	V	A	L	G	K	V	A	Q	S	L	V	H	G	A	R	I	V	Q	V	E	G	N	F	D	D	A	L	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S							S	S														T									T	T		S											T	T							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	Q	K	L	T	E	A	F	P	V	A	L	V	N	S	V	N	P	H	R	L	E	G	Q	K	T	L	A	F	E	V	V	D	E	L	G	D	A	P	H	Y	H	A	L	P	V	G	N	A	G	N	I	T	A	H	W	M	G	Y	K	A	Y	H	A	L	G	K	A	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S					S	T	T	S								T											S	S			S							S	S	S																T	T	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	P	R	M	L	G	F	Q	A	A	G	A	A	P	L	V	L	G	R	P	V	E	R	P	E	T	L	A	T	A	I	R	I	G	N	P	A	S	W	Q	G	A	V	R	A	K	E	E	S	G	G	V	I	E	A	V	T	D	E	E	I	L	F	A	Y	R	Y	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G						T	S			S	S				S		G	G	G			S	S		T	T												T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	E	G	I	F	C	E	P	A	S	A	A	A	M	A	G	V	F	K	L	L	R	E	G	R	L	E	P	E	S	T	V	V	L	T	L	T	G	H	G	L	K	D	P	A	T	A	E	R	V	A	E	L	P	P	P	V	P	A	R	L	E	A	V	A	A	A	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T				B																	T	T		S		S	S									B	B	G	G	G		G	G	G	G	G	G	T									S	S								T	T
	.
Sequence	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)