16/01/2012 03:58:00 : INFO  : Run start: Mon Jan 16 03:58:00 GMT 2012
16/01/2012 03:58:00 : INFO  : Initialised job
16/01/2012 03:58:00 : INFO  : Renaming log file 'phyre2_20120116_035800.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/88b7f83efcfa831e/phyre_20120116_035800.log'
16/01/2012 03:58:00 : INFO  : Initialised job:
Sequence
>batch____
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDAL
FSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ
LGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNE
HYLDTKAEKMGHLLNK

16/01/2012 03:58:00 : INFO  : Checked sequence
16/01/2012 03:58:00 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 03:58:00 : INFO  : PSI-BLAST 3 iterations
16/01/2012 03:59:28 : INFO  : PSI-BLAST 5 iterations
16/01/2012 04:00:32 : INFO  : Finished PSI-BLAST
16/01/2012 04:00:32 : INFO  : Running Buildali to generate a3m file
16/01/2012 04:04:46 : INFO  : Converting to HMM
16/01/2012 04:04:46 : INFO  : Calibrating HMM
16/01/2012 04:04:51 : INFO  : Searching HMM database
16/01/2012 04:08:50 : INFO  : Finished buildali
16/01/2012 04:08:50 : INFO  : Predicting secondary structure
16/01/2012 04:08:51 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 04:08:51 : INFO  : Predicting Disordered regions
16/01/2012 04:08:51 : INFO  : Predicted Disorder (Disopred)
16/01/2012 04:08:51 : INFO  : Running memsat_svm check
16/01/2012 04:09:32 : INFO  : Globular protein
16/01/2012 04:09:32 : INFO  : Predicted Transmembrane (memsat_svm) ID '88b7f83efcfa831e'
16/01/2012 04:09:32 : INFO  : Initialising fold library search
16/01/2012 04:09:33 : INFO  : Initialised search input
16/01/2012 04:09:33 : INFO  : Building Ensemble models
16/01/2012 04:09:33 : INFO  : Building hh.d2bz1a1.model.1.pdb
16/01/2012 04:09:33 : INFO  : Building d2bz1a1.1.pdb
16/01/2012 04:09:33 : INFO  : Building d1oi2a_.2.pdb
16/01/2012 04:09:34 : INFO  : Building d1ghsa_.3.pdb
16/01/2012 04:09:34 : INFO  : Building c1un9B_.4.pdb
16/01/2012 04:09:35 : INFO  : Building d2cyga1.5.pdb
16/01/2012 04:09:35 : INFO  : Building d1aq0a_.6.pdb
16/01/2012 04:09:36 : INFO  : Building c3f55A_.7.pdb
16/01/2012 04:09:37 : INFO  : Building c3ct4B_.8.pdb
16/01/2012 04:09:37 : INFO  : Building d1un8a4.9.pdb
16/01/2012 04:09:37 : INFO  : Building d1n71a_.10.pdb
16/01/2012 04:09:38 : INFO  : Building c2iu6B_.11.pdb
16/01/2012 04:09:38 : INFO  : Building d1v96a1.12.pdb
16/01/2012 04:09:38 : INFO  : Building d2g3aa1.13.pdb
16/01/2012 04:09:39 : INFO  : Building d1u6ma_.14.pdb
16/01/2012 04:09:39 : INFO  : Building d1y9wa1.15.pdb
16/01/2012 04:09:39 : INFO  : Building c2reeB_.16.pdb
16/01/2012 04:09:41 : INFO  : Building d1y82a1.17.pdb
16/01/2012 04:09:42 : INFO  : Building d1y9ka1.18.pdb
16/01/2012 04:09:42 : INFO  : Building c2w62A_.19.pdb
16/01/2012 04:09:42 : INFO  : Building d16pka_.20.pdb
16/01/2012 04:09:43 : INFO  : Finished HH model building
16/01/2012 04:09:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 04:09:46 : INFO  : html domain output complete ID '88b7f83efcfa831e'
16/01/2012 04:15:53 : INFO  : Run end  : Mon Jan 16 04:15:53 GMT 2012
