Email l.a.kelley@imperial.ac.uk Description P32664 Date Thu Jan 5 11:49:56 GMT 2012 Unique Job ID 6aac3adab07b09ec

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gb5B_ 100.0 97 PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution 2 c3cngC_ 100.0 23 PDB header:hydrolase Chain: C: PDB Molecule:nudix hydrolase; PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea 3 d1vk6a2 100.0 97 Fold:Nudix Superfamily:Nudix Family:NADH pyrophosphatase 4 c3q4iA_ 99.9 17 PDB header:hydrolase Chain: A: PDB Molecule:phosphohydrolase (mutt/nudix family protein); PDBTitle: crystal structure of cdp-chase in complex with gd3+ 5 d2fb1a2 99.9 19 Fold:Nudix Superfamily:Nudix Family:BT0354 N-terminal domain-like 6 c3gz8C_ 99.9 17 PDB header:dna binding protein Chain: C: PDB Molecule:mutt/nudix family protein; PDBTitle: cocrystal structure of nudix domain of shewanella oneidensis2 nrtr complexed with adp ribose 7 c2fb1A_ 99.9 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of protein bt0354 from bacteroides thetaiotaomicron 8 c3h95A_ 99.9 20 PDB header:gene regulation Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 6; PDBTitle: crystal structure of the nudix domain of nudt6 9 c3dkuB_ 99.9 19 PDB header:hydrolase Chain: B: PDB Molecule:putative phosphohydrolase; PDBTitle: crystal structure of nudix hydrolase orf153, ymfb, from2 escherichia coli k-1 10 d2b0va1 99.9 24 Fold:Nudix Superfamily:Nudix Family:MutT-like 11 d2fmla2 99.9 19 Fold:Nudix Superfamily:Nudix Family:BT0354 N-terminal domain-like 12 c3o8sA_ 99.9 23 PDB header:hydrolase Chain: A: PDB Molecule:adp-ribose pyrophosphatase; PDBTitle: crystal structure of an adp-ribose pyrophosphatase (ssu98_1448) from2 streptococcus suis 89-1591 at 2.27 a resolution 13 c2pq1B_ 99.9 20 PDB header:hydrolase Chain: B: PDB Molecule:ap4a hydrolase; PDBTitle: crystal structure of ap4a hydrolase complexed with amp and2 atp (aq_158) from aquifex aeolicus vf5 14 c3gg6A_ 99.9 24 PDB header:hydrolase Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 18; PDBTitle: crystal structure of the nudix domain of human nudt18 15 c2qjoB_ 99.9 19 PDB header:transferase, hydrolase Chain: B: PDB Molecule:bifunctional nmn adenylyltransferase/nudix hydrolase; PDBTitle: crystal structure of a bifunctional nmn adenylyltransferase/adp ribose2 pyrophosphatase (nadm) complexed with adprp and nad from3 synechocystis sp. 16 c3gz6A_ 99.8 18 PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna 17 d1sjya_ 99.8 24 Fold:Nudix Superfamily:Nudix Family:MutT-like 18 c3rh7A_ 99.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical oxidoreductase; PDBTitle: crystal structure of a hypothetical oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution 19 c3ef5A_ 99.8 22 PDB header:hydrolase Chain: A: PDB Molecule:probable pyrophosphohydrolase; PDBTitle: structure of the rna pyrophosphohydrolase bdrpph in complex with dgtp 20 c3grnB_ 99.8 21 PDB header:hydrolase Chain: B: PDB Molecule:mutt related protein; PDBTitle: crystal structure of mutt protein from methanosarcina mazei go1 21 c2yyhC_ not modelled 99.8 22 PDB header:hydrolase Chain: C: PDB Molecule:8-oxo-dgtpase domain; PDBTitle: crystal structure of nudix family protein from aquifex aeolicus 22 c2r5wA_ not modelled 99.8 19 PDB header:hydrolase, transferase Chain: A: PDB Molecule:nicotinamide-nucleotide adenylyltransferase; PDBTitle: crystal structure of a bifunctional nmn2 adenylyltransferase/adp ribose pyrophosphatase from3 francisella tularensis 23 d1vhza_ not modelled 99.8 18 Fold:Nudix Superfamily:Nudix Family:MutT-like 24 c3fk9B_ not modelled 99.8 23 PDB header:hydrolase Chain: B: PDB Molecule:mutator mutt protein; PDBTitle: crystal structure of mmutator mutt protein from bacillus2 halodurans 25 d1vk6a3 not modelled 99.8 98 Fold:Nudix Superfamily:Nudix Family:NADH pyrophosphatase 26 c3f6aA_ not modelled 99.8 22 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, nudix family; PDBTitle: crystal structure of a hydrolase, nudix family from2 clostridium perfringens 27 d1ryaa_ not modelled 99.8 18 Fold:Nudix Superfamily:Nudix Family:GDP-mannose mannosyl hydrolase NudD 28 c3gwyA_ not modelled 99.8 23 PDB header:hydrolase Chain: A: PDB Molecule:putative ctp pyrophosphohydrolase; PDBTitle: crystal structure of putative ctp pyrophosphohydrolase from2 bacteroides fragilis 29 c2fmlB_ not modelled 99.8 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of mutt/nudix family protein from enterococcus2 faecalis 30 c2kdvA_ not modelled 99.8 24 PDB header:hydrolase Chain: A: PDB Molecule:rna pyrophosphohydrolase; PDBTitle: solution structure of rna pyrophosphohydrolase rpph from2 escherichia coli 31 c3i9xA_ not modelled 99.8 19 PDB header:hydrolase Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of a mutt/nudix family protein from listeria innocua 32 d2azwa1 not modelled 99.8 20 Fold:Nudix Superfamily:Nudix Family:MutT-like 33 d1irya_ not modelled 99.8 22 Fold:Nudix Superfamily:Nudix Family:MutT-like 34 c3e57A_ not modelled 99.8 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein tm1382; PDBTitle: crystal structure of tm1382, a putative nudix hydrolase 35 d1k2ea_ not modelled 99.8 23 Fold:Nudix Superfamily:Nudix Family:MutT-like 36 c3r03B_ not modelled 99.8 24 PDB header:hydrolase Chain: B: PDB Molecule:nudix hydrolase; PDBTitle: the crystal structure of nudix hydrolase from rhodospirillum rubrum 37 d2b06a1 not modelled 99.8 23 Fold:Nudix Superfamily:Nudix Family:MutT-like 38 c3hhjA_ not modelled 99.8 23 PDB header:hydrolase Chain: A: PDB Molecule:mutator mutt protein; PDBTitle: crystal structure of mutator mutt from bartonella henselae 39 c2w4eA_ not modelled 99.8 19 PDB header:hydrolase Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: structure of an n-terminally truncated nudix hydrolase2 dr2204 from deinococcus radiodurans 40 d1v8ya_ not modelled 99.8 22 Fold:Nudix Superfamily:Nudix Family:MutT-like 41 d2fkba1 not modelled 99.8 15 Fold:Nudix Superfamily:Nudix Family:IPP isomerase-like 42 c2yvoA_ not modelled 99.8 28 PDB header:hydrolase Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of ndx2 in complex with mg2+ and amp from thermus2 thermophilus hb8 43 d1vcda1 not modelled 99.8 21 Fold:Nudix Superfamily:Nudix Family:MutT-like 44 d1g0sa_ not modelled 99.8 18 Fold:Nudix Superfamily:Nudix Family:MutT-like 45 c3id9B_ not modelled 99.8 27 PDB header:hydrolase Chain: B: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of a mutt/nudix family protein from2 bacillus thuringiensis 46 c2jvbA_ not modelled 99.8 17 PDB header:hydrolase Chain: A: PDB Molecule:mrna-decapping enzyme subunit 2; PDBTitle: solution structure of catalytic domain of ydcp2 47 c2pqvA_ not modelled 99.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of mutt/nudix family protein from streptococcus2 pneumoniae 48 c3n77B_ not modelled 99.8 25 PDB header:hydrolase Chain: B: PDB Molecule:nucleoside triphosphatase nudi; PDBTitle: crystal structure of idp01880, putative ntp pyrophosphohydrolase of2 salmonella typhimurium lt2 49 c3fjyB_ not modelled 99.8 20 PDB header:hydrolase Chain: B: PDB Molecule:probable mutt1 protein; PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis 50 d2fvva1 not modelled 99.8 20 Fold:Nudix Superfamily:Nudix Family:MutT-like 51 c2fvvA_ not modelled 99.8 20 PDB header:hydrolase Chain: A: PDB Molecule:diphosphoinositol polyphosphate phosphohydrolase PDBTitle: human diphosphoinositol polyphosphate phosphohydrolase 1 52 c3exqA_ not modelled 99.8 21 PDB header:hydrolase Chain: A: PDB Molecule:nudix family hydrolase; PDBTitle: crystal structure of a nudix family hydrolase from2 lactobacillus brevis 53 d1puna_ not modelled 99.8 20 Fold:Nudix Superfamily:Nudix Family:MutT-like 54 c3bm4B_ not modelled 99.7 20 PDB header:hydrolase Chain: B: PDB Molecule:adp-sugar pyrophosphatase; PDBTitle: crystal structure of human adp-ribose pyrophosphatase nudt52 in complex with magnesium and ampcpr 55 c2o1cB_ not modelled 99.7 23 PDB header:hydrolase Chain: B: PDB Molecule:datp pyrophosphohydrolase; PDBTitle: structure of the e. coli dihydroneopterin triphosphate2 pyrophosphohydrolase 56 c3f13A_ not modelled 99.7 22 PDB header:hydrolase Chain: A: PDB Molecule:putative nudix hydrolase family member; PDBTitle: crystal structure of putative nudix hydrolase family member2 from chromobacterium violaceum 57 d1ktga_ not modelled 99.7 19 Fold:Nudix Superfamily:Nudix Family:MutT-like 58 d1jkna_ not modelled 99.7 18 Fold:Nudix Superfamily:Nudix Family:MutT-like 59 d2a6ta2 not modelled 99.7 15 Fold:Nudix Superfamily:Nudix Family:mRNA decapping enzyme-like 60 d1xsba_ not modelled 99.7 17 Fold:Nudix Superfamily:Nudix Family:MutT-like 61 d1nqza_ not modelled 99.7 20 Fold:Nudix Superfamily:Nudix Family:MutT-like 62 c3sonB_ not modelled 99.7 16 PDB header:hydrolase Chain: B: PDB Molecule:hypothetical nudix hydrolase; PDBTitle: crystal structure of a hypothetical nudix hydrolase (lmof2365_2679)2 from listeria monocytogenes (atcc 19115) at 1.70 a resolution 63 c2qkmF_ not modelled 99.7 16 PDB header:hydrolase Chain: F: PDB Molecule:spac19a8.12 protein; PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex 64 d2o5fa1 not modelled 99.7 18 Fold:Nudix Superfamily:Nudix Family:IPP isomerase-like 65 c3edsA_ not modelled 99.7 25 PDB header:hydrolase Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of a mut/nudix family protein from bacillus2 thuringiensis 66 d1q33a_ not modelled 99.7 22 Fold:Nudix Superfamily:Nudix Family:MutT-like 67 d1ppva_ not modelled 99.7 18 Fold:Nudix Superfamily:Nudix Family:IPP isomerase-like 68 c3fcmA_ not modelled 99.7 10 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, nudix family; PDBTitle: crystal structure of a nudix hydrolase from clostridium2 perfringens 69 d1hzta_ not modelled 99.7 17 Fold:Nudix Superfamily:Nudix Family:IPP isomerase-like 70 d1mqea_ not modelled 99.7 19 Fold:Nudix Superfamily:Nudix Family:MutT-like 71 d1viua_ not modelled 99.7 18 Fold:Nudix Superfamily:Nudix Family:MutT-like 72 c3q91D_ not modelled 99.6 21 PDB header:hydrolase Chain: D: PDB Molecule:uridine diphosphate glucose pyrophosphatase; PDBTitle: crystal structure of human uridine diphosphate glucose pyrophosphatase2 (nudt14) 73 c1rrqA_ not modelled 99.6 13 PDB header:hydrolase/dna Chain: A: PDB Molecule:muty; PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair 74 d1x51a1 not modelled 99.6 12 Fold:Nudix Superfamily:Nudix Family:MutY C-terminal domain-like 75 d1rrqa2 not modelled 99.6 13 Fold:Nudix Superfamily:Nudix Family:MutY C-terminal domain-like 76 c2i6kA_ not modelled 99.5 17 PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog 77 c3dupB_ not modelled 99.4 11 PDB header:hydrolase Chain: B: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of mutt/nudix family hydrolase from rhodospirillum2 rubrum atcc 11170 78 c2pnyA_ not modelled 99.3 16 PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 79 d1u20a1 not modelled 99.3 19 Fold:Nudix Superfamily:Nudix Family:MutT-like 80 c2j8qB_ not modelled 99.2 16 PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. 81 c3qsjA_ not modelled 98.9 32 PDB header:hydrolase Chain: A: PDB Molecule:nudix hydrolase; PDBTitle: crystal structure of nudix hydrolase from alicyclobacillus2 acidocaldarius 82 c3couA_ not modelled 98.4 24 PDB header:hydrolase Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 16; PDBTitle: crystal structure of human nudix motif 16 (nudt16) 83 c3kvhA_ not modelled 97.9 15 PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) 84 c3p5tE_ not modelled 95.2 17 PDB header:rna binding protein Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; PDBTitle: cfim25-cfim68 complex 85 d2ct7a1 not modelled 94.1 13 Fold:RING/U-box Superfamily:RING/U-box Family:IBR domain 86 d2fiya1 not modelled 93.2 23 Fold:FdhE-like Superfamily:FdhE-like Family:FdhE-like 87 c1i3qI_ not modelled 93.0 21 PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution 88 c1nnjA_ not modelled 92.8 21 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna 89 d2k4xa1 not modelled 92.6 22 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein S27a 90 c2js4A_ not modelled 92.5 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein bb2007; PDBTitle: solution nmr structure of bordetella bronchiseptica protein2 bb2007. northeast structural genomics consortium target3 bor54 91 c2f5qA_ not modelled 92.5 21 PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 92 c2jr6A_ not modelled 92.0 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein nma0874; PDBTitle: solution structure of upf0434 protein nma0874. northeast structural2 genomics target mr32 93 c3h0gI_ not modelled 92.0 25 PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii subunit rpb9; PDBTitle: rna polymerase ii from schizosaccharomyces pombe 94 c1k82D_ not modelled 91.9 20 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 95 c2opfA_ not modelled 91.8 20 PDB header:hydrolase/dna Chain: A: PDB Molecule:endonuclease viii; PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate 96 d2jnya1 not modelled 91.4 12 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 97 c2aklA_ not modelled 90.6 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phna-like protein pa0128; PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa 98 d2pk7a1 not modelled 90.0 15 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 99 c2kpiA_ not modelled 89.2 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein sco3027; PDBTitle: solution nmr structure of streptomyces coelicolor sco30272 modeled with zn+2 bound, northeast structural genomics3 consortium target rr58 100 c1ee8A_ not modelled 89.1 21 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 101 d2hf1a1 not modelled 88.9 19 Fold:Trm112p-like Superfamily:Trm112p-like Family:Trm112p-like 102 d1pfta_ not modelled 88.1 21 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 103 c2pziA_ not modelled 87.9 13 PDB header:transferase Chain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017 104 c1hk8A_ not modelled 87.4 25 PDB header:oxidoreductase Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase; PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp 105 d1hk8a_ not modelled 87.4 25 Fold:PFL-like glycyl radical enzymes Superfamily:PFL-like glycyl radical enzymes Family:Class III anaerobic ribonucleotide reductase NRDD subunit 106 c2k5cA_ not modelled 86.9 28 PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein pf0385; PDBTitle: nmr structure for pf0385 107 d2akla2 not modelled 86.0 22 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:PhnA zinc-binding domain 108 d1ee8a3 not modelled 85.7 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 109 c1vddC_ not modelled 85.5 19 PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr 110 d1tdza3 not modelled 85.2 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 111 d1vdda_ not modelled 85.1 15 Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR 112 d1x3za1 not modelled 84.5 20 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 113 d1r2za3 not modelled 84.4 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 114 c2ba1B_ not modelled 83.4 23 PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core 115 d2f4ma1 not modelled 82.9 19 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 116 d1k82a3 not modelled 82.1 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 117 d1k3xa3 not modelled 82.0 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 118 c2owoA_ not modelled 81.9 22 PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate 119 c3k7aM_ not modelled 81.7 17 PDB header:transcription Chain: M: PDB Molecule:transcription initiation factor iib; PDBTitle: crystal structure of an rna polymerase ii-tfiib complex 120 d1dl6a_ not modelled 81.5 13 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain