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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c1i3qI_ | PDB header: transcription | Chain: I: PDB Molecule: dna-directed rna polymerase ii 14.2kd | PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution |
| Added to library: Tue Mar 16 12:13:54 2010 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | M | T | T | F | R | F | C | R | D | C | N | N | M | L | Y | P | R | E | D | K | E | N | N | R | L | L | F | E | C | R | T | C | S | Y | V | E | E | A | G | S | P | L | V | Y | R | H | E | L | I | T | N | I | G | E | T | A | G | V | V | Q | D | I | G | S | D | P | T | L | P | R |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | B | S | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | S | S | S | S | T | T | S | S | S | T | T | G | G | G | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
| Sequence | S | D | R | E | C | P | K | C | H | S | R | E | N | V | F | F | Q | S | Q | Q | R | R | K | D | T | S | M | V | L | F | F | V | C | L | S | C | S | H | I | F | T | S | D | Q | K | N | K | R | T | Q | F | S | ||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | T | S | B | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | B | T | T | T | ![]() | ![]() | ![]() | T | T | S | S |
| Download: | PDB structure | FASTA sequence |
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