PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qsjA_

Fold library id	PDB Header	Molecule	Title
c3qsjA_	PDB header: hydrolase	Chain: A: PDB Molecule: nudix hydrolase;	PDBTitle: crystal structure of nudix hydrolase from alicyclobacillus2 acidocaldarius

Links to external resources
Added to library: Sat Apr 16 08:49:52 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X T D I R K A A T L V V I R D G A N K D I E V L V V R R A K T X R F L P G F V A F P G G A A D P S D A E X A K R A F G R P V C A E D D D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
S S S T T
S
T
B S
B T
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P A L A V T A L R E T A E E I G W L L A V R D G E G T K X D T P L A P D E Q A D L C K G G D A L S A W L S A R G L A F D L G L L R R I G R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T
B
S
T T
T T T T T
B G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V T P P T Q P V R F D T R F F L C V G Q H L G E P R L H G A E L D A A L W T P A R D X L T R I Q S G E L P A V R P T I A V L K A L V A C P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
S S
S S S T T S S
S

. . . . . . . . . 220 . .

Sequence A E I A X S T L S I G P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	T	D	I	R	K	A	A	T	L	V	V	I	R	D	G	A	N	K	D	I	E	V	L	V	V	R	R	A	K	T	X	R	F	L	P	G	F	V	A	F	P	G	G	A	A	D	P	S	D	A	E	X	A	K	R	A	F	G	R	P	V	C	A	E	D	D	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		G	G	G											T	T		S	S	S	T	T					S														T		B	S			B	T			S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	L	A	V	T	A	L	R	E	T	A	E	E	I	G	W	L	L	A	V	R	D	G	E	G	T	K	X	D	T	P	L	A	P	D	E	Q	A	D	L	C	K	G	G	D	A	L	S	A	W	L	S	A	R	G	L	A	F	D	L	G	L	L	R	R	I	G	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S				S				T	T			B			S											T	T		T	T								T	T	T				B	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	T	P	P	T	Q	P	V	R	F	D	T	R	F	F	L	C	V	G	Q	H	L	G	E	P	R	L	H	G	A	E	L	D	A	A	L	W	T	P	A	R	D	X	L	T	R	I	Q	S	G	E	L	P	A	V	R	P	T	I	A	V	L	K	A	L	V	A	C	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	S												S	S								S	S	S																		T	T	S	S																	S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	A	E	I	A	X	S	T	L	S	I	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)