Email l.a.kelley@imperial.ac.uk Description P0AFR4 Date Thu Jan 5 11:27:03 GMT 2012 Unique Job ID 5f2bd92b773bd97a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1k7ja_ 100.0 97 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 2 c2eqaA_ 100.0 28 PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii 3 d1jcua_ 100.0 30 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 4 d1hrua_ 100.0 23 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 5 c3l7vA_ 100.0 23 PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein smu.1377c; PDBTitle: crystal structure of a hypothetical protein smu.1377c from2 streptococcus mutans ua159 6 c3tsuA_ 100.0 18 PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate 7 d1t5la1 81.0 13 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 8 c2frxD_ 52.7 28 PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli 9 d1d4oa_ 48.9 17 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 10 c1pt9B_ 48.5 17 PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue 11 c3m4xA_ 48.0 21 PDB header:transferase Chain: A: PDB Molecule:nol1/nop2/sun family protein; PDBTitle: structure of a ribosomal methyltransferase 12 c3m6wA_ 43.3 31 PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine 13 c2bruC_ 42.8 20 PDB header:oxidoreductase Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase 14 d1pnoa_ 41.7 17 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 15 c2oemA_ 41.5 18 PDB header:isomerase Chain: A: PDB Molecule:2,3-diketo-5-methylthiopentyl-1-phosphate enolase; PDBTitle: crystal structure of a rubisco-like protein from geobacillus2 kaustophilus liganded with mg2+ and 2,3-diketohexane 1-phosphate 16 d1hq0a_ 40.9 26 Fold:CNF1/YfiH-like putative cysteine hydrolases Superfamily:CNF1/YfiH-like putative cysteine hydrolases Family:Type 1 cytotoxic necrotizing factor, catalytic domain 17 d1ixka_ 37.1 28 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:NOL1/NOP2/sun 18 c3fk4A_ 36.3 17 PDB header:isomerase Chain: A: PDB Molecule:rubisco-like protein; PDBTitle: crystal structure of rubisco-like protein from bacillus2 cereus atcc 14579 19 c3p3dA_ 35.2 32 PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii 20 c3nwrA_ 33.8 22 PDB header:lyase Chain: A: PDB Molecule:a rubisco-like protein; PDBTitle: crystal structure of a rubisco-like protein from burkholderia fungorum 21 d1ykwa1 not modelled 32.9 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 22 d2d69a1 not modelled 32.6 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 23 c2zviB_ not modelled 32.3 19 PDB header:isomerase Chain: B: PDB Molecule:2,3-diketo-5-methylthiopentyl-1-phosphate PDBTitle: crystal structure of 2,3-diketo-5-methylthiopentyl-1-2 phosphate enolase from bacillus subtilis 24 d1sqga2 not modelled 32.0 23 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:NOL1/NOP2/sun 25 d1rbla1 not modelled 31.3 19 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 26 d1bxna1 not modelled 30.5 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 27 d1ej7l1 not modelled 29.6 15 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 28 c2qj8B_ not modelled 29.1 22 PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution 29 c2qs0A_ not modelled 27.5 9 PDB header:biosynthetic protein Chain: A: PDB Molecule:quinolinate synthetase a; PDBTitle: quinolinate synthase from pyrococcus furiosus 30 c3qfwB_ not modelled 27.1 17 PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris 31 c3mioA_ not modelled 27.0 10 PDB header:lyase Chain: A: PDB Molecule:3,4-dihydroxy-2-butanone 4-phosphate synthase; PDBTitle: crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase2 domain from mycobacterium tuberculosis at ph 6.00 32 d1gk8a1 not modelled 26.9 14 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 33 c2yxlA_ not modelled 25.5 28 PDB header:transferase Chain: A: PDB Molecule:450aa long hypothetical fmu protein; PDBTitle: crystal structure of ph0851 34 c1sqgA_ not modelled 25.5 23 PDB header:transferase Chain: A: PDB Molecule:sun protein; PDBTitle: the crystal structure of the e. coli fmu apoenzyme at 1.652 a resolution 35 d1svda1 not modelled 25.4 13 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 36 c3hjhA_ not modelled 25.3 11 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor 37 c3a4tA_ not modelled 23.7 28 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase mj0026; PDBTitle: crystal structure of atrm4 from m.jannaschii with sinefungin 38 c3axtA_ not modelled 23.0 13 PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine 39 c1solA_ not modelled 22.9 7 PDB header:actin-binding protein Chain: A: PDB Molecule:gelsolin (150-169); PDBTitle: a pip2 and f-actin-binding site of gelsolin, residue 150-2 169 (nmr, averaged structure) 40 d1c4oa1 not modelled 22.8 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 41 d1geha1 not modelled 22.4 17 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 42 c1rldB_ not modelled 21.2 15 PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:ribulose 1,5 bisphosphate carboxylase/oxygenase (large PDBTitle: solid-state phase transition in the crystal structure of ribulose 1,5-2 biphosphate carboxylase(slash)oxygenase 43 d1snna_ not modelled 21.2 15 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 44 d2dula1 not modelled 21.0 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TRM1-like 45 c2d69B_ not modelled 20.5 15 PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) 46 d1r0ua_ not modelled 20.1 20 Fold:Lipocalins Superfamily:Lipocalins Family:Hypothetical protein YwiB 47 c2qygC_ not modelled 18.7 13 PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris 48 c1rcxH_ not modelled 17.6 15 PDB header:lyase (carbon-carbon) Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate 49 c1telA_ not modelled 16.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum 50 d1bwva1 not modelled 16.9 16 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 51 c2gq1A_ not modelled 14.7 22 PDB header:hydrolase Chain: A: PDB Molecule:fructose-1,6-bisphosphatase; PDBTitle: crystal structure of recombinant type i fructose-1,6-bisphosphatase2 from escherichia coli complexed with sulfate ions 52 d8ruca1 not modelled 14.6 16 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 53 c1gehE_ not modelled 14.5 17 PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) 54 c2fhyL_ not modelled 14.0 12 PDB header:hydrolase Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1; PDBTitle: structure of human liver fpbase complexed with a novel2 benzoxazole as allosteric inhibitor 55 d2eyqa4 not modelled 14.0 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 56 c3n0vD_ not modelled 12.9 12 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution 57 c3p04A_ not modelled 12.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 58 d1tksa_ not modelled 12.0 21 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 59 c3ckkA_ not modelled 11.6 25 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: crystal structure of human methyltransferase-like protein 1 60 d1nuwa_ not modelled 11.6 16 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 61 d1k4ia_ not modelled 11.6 15 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 62 c3louB_ not modelled 11.5 12 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution 63 c1kevB_ not modelled 11.4 7 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: structure of nadp-dependent alcohol dehydrogenase 64 d1wdda1 not modelled 10.7 16 Fold:TIM beta/alpha-barrel Superfamily:RuBisCo, C-terminal domain Family:RuBisCo, large subunit, C-terminal domain 65 c2ekgB_ not modelled 10.6 10 PDB header:oxidoreductase Chain: B: PDB Molecule:proline dehydrogenase/delta-1-pyrroline-5-carboxylate PDBTitle: structure of thermus thermophilus proline dehydrogenase inactivated by2 n-propargylglycine 66 d1bhea_ not modelled 10.4 15 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 67 c2eyqA_ not modelled 9.9 12 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor 68 c2vduE_ not modelled 9.9 25 PDB header:transferase Chain: E: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex 69 d1ftaa_ not modelled 9.8 12 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 70 c3crw1_ not modelled 9.3 29 PDB header:hydrolase Chain: 1: PDB Molecule:xpd/rad3 related dna helicase; PDBTitle: "xpd_apo" 71 c1bwvA_ not modelled 8.9 16 PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate 72 d1d9qa_ not modelled 8.6 22 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 73 d1duvg1 not modelled 8.3 17 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 74 d1h80a_ not modelled 8.2 18 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:iota-carrageenase 75 d1q32a2 not modelled 8.2 44 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 76 d2hi6a1 not modelled 8.1 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:AF0055-like 77 d1g57a_ not modelled 7.7 12 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 78 d2f06a1 not modelled 7.7 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 79 c3p04B_ not modelled 7.6 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 80 d1knza_ not modelled 7.5 17 Fold:NSP3 homodimer Superfamily:NSP3 homodimer Family:NSP3 homodimer 81 c2ouiB_ not modelled 7.2 8 PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: d275p mutant of alcohol dehydrogenase from protozoa entamoeba2 histolytica 82 d1spia_ not modelled 7.2 24 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 83 d1bk4a_ not modelled 7.1 16 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 84 d1yksa2 not modelled 7.1 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RNA helicase 85 c2y75F_ not modelled 7.1 25 PDB header:transcription Chain: F: PDB Molecule:hth-type transcriptional regulator cymr; PDBTitle: the structure of cymr (yrzc) the global cysteine regulator2 of b. subtilis 86 d1xcfa_ not modelled 7.0 11 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 87 c3d7aB_ not modelled 7.0 14 PDB header:unknown function Chain: B: PDB Molecule:upf0201 protein ph1010; PDBTitle: crystal structure of duf54 family protein ph1010 from2 hyperthermophilic archaea pyrococcus horikoshii ot3 88 c1f8fA_ not modelled 7.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:benzyl alcohol dehydrogenase; PDBTitle: crystal structure of benzyl alcohol dehydrogenase from acinetobacter2 calcoaceticus 89 d1otha1 not modelled 6.9 16 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 90 d1tg7a3 not modelled 6.7 18 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Beta-galactosidase LacA, domains 4 and 5 91 d1jy1a2 not modelled 6.6 44 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 92 c1r37B_ not modelled 6.4 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase from sulfolobus solfataricus2 complexed with nad(h) and 2-ethoxyethanol 93 d1zq1a2 not modelled 6.3 24 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 94 d1yzha1 not modelled 6.2 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 95 d1mvfd_ not modelled 6.0 38 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 96 d2b2na1 not modelled 5.9 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 97 d1vlva1 not modelled 5.8 23 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 98 c2v34B_ not modelled 5.7 16 PDB header:transferase Chain: B: PDB Molecule:4-diphosphocytidyl-2c-methyl-d-erythritol kinase; PDBTitle: ispe in complex with cytidine and ligand 99 c3h1tA_ not modelled 5.7 44 PDB header:hydrolase Chain: A: PDB Molecule:type i site-specific restriction-modification PDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016