PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2v34B_

Fold library id	PDB Header	Molecule	Title
c2v34B_	PDB header: transferase	Chain: B: PDB Molecule: 4-diphosphocytidyl-2c-methyl-d-erythritol kinase;	PDBTitle: ispe in complex with cytidine and ligand

Links to external resources
Added to library: Tue Mar 16 13:10:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S H M I K V L S P A K I N L G L W V L G R L P S G Y H E I L T L Y Q E I P F Y D E I Y I R E G V L R V E T N I G I P Q E E N L V Y K G L R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
S S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F E R I T G I E I N Y S I F I Q K N I P P G A G L G G G S S N L A V V L K K V N E L L G S P L S E E E L R E L V G S I S A D A P F F L L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S S S
T T
S
T T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S A I G R G K G E V L E P V E T E I S G K I T L V I P Q V S S S T G R V Y S S L R E E H F V T P E Y A E E K I Q R I I S G E V E E I E N V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
S S
T
G G G
T T
G G G
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270

Sequence G D I A R E L Y P E I N E V Y R F V E Y L G F K P F V S G S G S T V Y F F G G A S E E L K K A A K M R G W K V V E L E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	M	I	K	V	L	S	P	A	K	I	N	L	G	L	W	V	L	G	R	L	P	S	G	Y	H	E	I	L	T	L	Y	Q	E	I	P	F	Y	D	E	I	Y	I	R	E	G	V	L	R	V	E	T	N	I	G	I	P	Q	E	E	N	L	V	Y	K	G	L	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T	S																						S	S						S	S				G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	E	R	I	T	G	I	E	I	N	Y	S	I	F	I	Q	K	N	I	P	P	G	A	G	L	G	G	G	S	S	N	L	A	V	V	L	K	K	V	N	E	L	L	G	S	P	L	S	E	E	E	L	R	E	L	V	G	S	I	S	A	D	A	P	F	F	L	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S		T	T	S	S	S																		T	T			S														T	T					T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	I	G	R	G	K	G	E	V	L	E	P	V	E	T	E	I	S	G	K	I	T	L	V	I	P	Q	V	S	S	S	T	G	R	V	Y	S	S	L	R	E	E	H	F	V	T	P	E	Y	A	E	E	K	I	Q	R	I	I	S	G	E	V	E	E	I	E	N	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T											S								S	S										T			G	G	G																T	T		G	G	G			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Sequence	G	D	I	A	R	E	L	Y	P	E	I	N	E	V	Y	R	F	V	E	Y	L	G	F	K	P	F	V	S	G	S	G	S	T	V	Y	F	F	G	G	A	S	E	E	L	K	K	A	A	K	M	R	G	W	K	V	V	E	L	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T							T	T	S	S					S	S														T