PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ckkA_

Fold library id	PDB Header	Molecule	Title
c3ckkA_	PDB header: transferase	Chain: A: PDB Molecule: trna (guanine-n(7)-)-methyltransferase;	PDBTitle: crystal structure of human methyltransferase-like protein 1

Links to external resources
Added to library: Tue Mar 16 12:05:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y P V K P E E M D W S E L Y P E F A Q V E F A D I G C G Y G G L L V E L S P L F P D T L I L G L E I R V K V S D Y V Q D R I R A L R A A P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
T T T
T T
T
T T
G G G S T T S S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G G F Q N I A C L R S N A M K H L P N F F Y K G Q L T K M F F L F P D I I S P T L L A E Y A Y V L R V G G L V Y T I T D V L E L H D W M C T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . .

Sequence H F E E H P L F E R V P L E D L S E D P V V G H L G T S T E E G K K V L R N G G K N F P A I F R R I Q D P V L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
G G G G T T
T T G G G T T T S S T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	P	V	K	P	E	E	M	D	W	S	E	L	Y	P	E	F	A	Q	V	E	F	A	D	I	G	C	G	Y	G	G	L	L	V	E	L	S	P	L	F	P	D	T	L	I	L	G	L	E	I	R	V	K	V	S	D	Y	V	Q	D	R	I	R	A	L	R	A	A	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	G	G	G				T	T	T		T	T										T		T	T								G	G	G	S	T	T	S							S																		S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	F	Q	N	I	A	C	L	R	S	N	A	M	K	H	L	P	N	F	F	Y	K	G	Q	L	T	K	M	F	F	L	F	P	D	I	I	S	P	T	L	L	A	E	Y	A	Y	V	L	R	V	G	G	L	V	Y	T	I	T	D	V	L	E	L	H	D	W	M	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T								T	T	T								T	T									S																											S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Sequence	H	F	E	E	H	P	L	F	E	R	V	P	L	E	D	L	S	E	D	P	V	V	G	H	L	G	T	S	T	E	E	G	K	K	V	L	R	N	G	G	K	N	F	P	A	I	F	R	R	I	Q	D	P	V	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T						G	G	G	G	T	T		T	T	G	G	G	T	T	T	S	S									T	T														T	T	T