Email l.a.kelley@imperial.ac.uk Description P77562 Date Thu Jan 5 12:30:35 GMT 2012 Unique Job ID 5ed76fbabc693a5e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1qsaa2 93.0 25 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Bacterial muramidase, catalytic domain 2 c1slyA_ 82.0 31 PDB header:glycosyltransferase Chain: A: PDB Molecule:70-kda soluble lytic transglycosylase; PDBTitle: complex of the 70-kda soluble lytic transglycosylase with2 bulgecin a 3 c3ct5A_ 71.0 23 PDB header:hydrolase Chain: A: PDB Molecule:morphogenesis protein 1; PDBTitle: crystal and cryoem structural studies of a cell wall degrading enzyme2 in the bacteriophage phi29 tail 4 c2y8pA_ 70.1 11 PDB header:lyase Chain: A: PDB Molecule:endo-type membrane-bound lytic murein transglycosylase a; PDBTitle: crystal structure of an outer membrane-anchored endolytic2 peptidoglycan lytic transglycosylase (mlte) from3 escherichia coli 5 d1gbsa_ 70.0 11 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:G-type lysozyme 6 c3mgwA_ 69.0 13 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme g; PDBTitle: thermodynamics and structure of a salmon cold-active goose-type2 lysozyme 7 c3gxkB_ 65.6 11 PDB header:hydrolase Chain: B: PDB Molecule:goose-type lysozyme 1; PDBTitle: the crystal structure of g-type lysozyme from atlantic cod2 (gadus morhua l.) in complex with nag oligomers sheds new3 light on substrate binding and the catalytic mechanism.4 native structure to 1.9 8 c3csqC_ 54.9 24 PDB header:hydrolase Chain: C: PDB Molecule:morphogenesis protein 1; PDBTitle: crystal and cryoem structural studies of a cell wall2 degrading enzyme in the bacteriophage phi29 tail 9 d1kyqa2 50.6 21 Fold:Siroheme synthase middle domains-like Superfamily:Siroheme synthase middle domains-like Family:Siroheme synthase middle domains-like 10 d2dt5a1 43.6 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional repressor Rex, N-terminal domain 11 c1kyqC_ 36.9 23 PDB header:oxidoreductase, lyase Chain: C: PDB Molecule:siroheme biosynthesis protein met8; PDBTitle: met8p: a bifunctional nad-dependent dehydrogenase and2 ferrochelatase involved in siroheme synthesis. 12 c1itkB_ 35.0 15 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of catalase-peroxidase from haloarcula2 marismortui 13 c3bbzA_ 34.3 32 PDB header:viral protein, replication Chain: A: PDB Molecule:p protein; PDBTitle: structure of the nucleocapsid-binding domain from the mumps2 virus phosphoprotein 14 c2wscL_ 33.9 24 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem i reaction center subunit xi, PDBTitle: improved model of plant photosystem i 15 d1af7a1 30.1 13 Fold:Chemotaxis receptor methyltransferase CheR, N-terminal domain Superfamily:Chemotaxis receptor methyltransferase CheR, N-terminal domain Family:Chemotaxis receptor methyltransferase CheR, N-terminal domain 16 c1ub2A_ 29.9 38 PDB header:oxidoreductase Chain: A: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of catalase-peroxidase from synechococcus pcc 7942 17 d2eyqa6 26.4 38 Fold:TRCF domain-like Superfamily:TRCF domain-like Family:TRCF domain 18 c3kxaD_ 26.3 25 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae 19 d1tc3c_ 25.1 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 20 d2evra2 24.9 25 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 21 d1pdnc_ not modelled 24.7 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 22 c2dw3A_ not modelled 22.6 46 PDB header:photosynthesis Chain: A: PDB Molecule:intrinsic membrane protein pufx; PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein 23 c2qsrA_ not modelled 22.5 10 PDB header:transcription Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of c-terminal domain of transcription-repair2 coupling factor 24 c2ql2A_ not modelled 21.5 27 PDB header:transcription/dna Chain: A: PDB Molecule:transcription factor e2-alpha; PDBTitle: crystal structure of the basic-helix-loop-helix domains of2 the heterodimer e47/neurod1 bound to dna 25 c3h4zC_ not modelled 20.8 12 PDB header:allergen Chain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein 26 c1n6dE_ not modelled 19.8 10 PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative 27 c1k32E_ not modelled 19.8 10 PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease 28 c6paxA_ not modelled 19.6 17 PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions 29 d2o3aa1 not modelled 19.2 19 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:AF0751-like 30 d1a6qa1 not modelled 19.1 24 Fold:Another 3-helical bundle Superfamily:Protein serine/threonine phosphatase 2C, C-terminal domain Family:Protein serine/threonine phosphatase 2C, C-terminal domain 31 d1x2ma1 not modelled 19.0 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 32 c1ee8A_ not modelled 18.6 31 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 33 c3g9wA_ not modelled 17.7 12 PDB header:cell adhesion Chain: A: PDB Molecule:talin-2; PDBTitle: crystal structure of talin2 f2-f3 in complex with the integrin beta1d2 cytoplasmic tail 34 c3dhiA_ not modelled 17.1 17 PDB header:oxidoreductase Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit; PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein 35 d1txga1 not modelled 17.0 31 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Glycerol-3-phosphate dehydrogenase 36 d1rioa_ not modelled 16.9 18 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 37 d1ul1x1 not modelled 15.5 15 Fold:SAM domain-like Superfamily:5' to 3' exonuclease, C-terminal subdomain Family:5' to 3' exonuclease, C-terminal subdomain 38 c2dt5A_ not modelled 15.4 19 PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 39 c3ketA_ not modelled 15.1 31 PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator 40 c1go4F_ not modelled 13.7 10 PDB header:cell cycle Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1; PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20. 41 d2cqxa1 not modelled 13.5 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 42 d1llib_ not modelled 13.3 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 43 d1s69a_ not modelled 13.1 17 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 44 d1uhsa_ not modelled 12.9 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 45 c2di7A_ not modelled 12.6 22 PDB header:structural protein Chain: A: PDB Molecule:bk158_1; PDBTitle: solution structure of the filamin domain from human bk158_12 protein 46 c2bmmA_ not modelled 12.6 11 PDB header:oxygen storage/transport Chain: A: PDB Molecule:thermostable hemoglobin from thermobifida fusca; PDBTitle: x-ray structure of a novel thermostable hemoglobin from the2 actinobacterium thermobifida fusca 47 c3mmyF_ not modelled 12.5 33 PDB header:nuclear protein Chain: F: PDB Molecule:nuclear pore complex protein nup98; PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1 48 c3f6wE_ not modelled 11.6 12 PDB header:dna binding protein Chain: E: PDB Molecule:xre-family like protein; PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000 49 d1vhna_ not modelled 11.5 12 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 50 d1s95a_ not modelled 11.2 18 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 51 c2k25A_ not modelled 10.7 18 PDB header:unknown function Chain: A: PDB Molecule:ubb; PDBTitle: automated nmr structure of the ubb by fapsy 52 d1k32a4 not modelled 10.7 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain 53 d1j5ya1 not modelled 10.6 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Biotin repressor-like 54 c2fxhB_ not modelled 10.2 29 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase protein; PDBTitle: crystal structure of katg at ph 6.5 55 c2b2qB_ not modelled 10.2 29 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of native catalase-peroxidase katg at2 ph7.5 56 c2o01L_ not modelled 10.1 24 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem i reaction center subunit xi, PDBTitle: the structure of a plant photosystem i supercomplex at 3.42 angstrom resolution 57 d1lmb3_ not modelled 9.7 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 58 c1nnjA_ not modelled 9.5 29 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna 59 c2wusR_ not modelled 9.3 19 PDB header:structural protein Chain: R: PDB Molecule:putative uncharacterized protein; PDBTitle: bacterial actin mreb assembles in complex with cell shape2 protein rodz 60 d1lkxa_ not modelled 9.2 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Motor proteins 61 c2k1gA_ not modelled 9.1 15 PDB header:lipoprotein Chain: A: PDB Molecule:lipoprotein spr; PDBTitle: solution nmr structure of lipoprotein spr from escherichia coli k12.2 northeast structural genomics target er541-37-162 62 d2ppxa1 not modelled 9.0 22 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 63 c2ppxA_ not modelled 9.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1735; PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens 64 d2b5ea2 not modelled 8.9 53 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 65 c2kscA_ not modelled 8.7 11 PDB header:unknown function Chain: A: PDB Molecule:cyanoglobin; PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin 66 d3c5wc1 not modelled 8.4 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 67 c1fuiB_ not modelled 8.3 18 PDB header:isomerase Chain: B: PDB Molecule:l-fucose isomerase; PDBTitle: l-fucose isomerase from escherichia coli 68 c2jf1A_ not modelled 7.7 32 PDB header:cell adhesion Chain: A: PDB Molecule:filamin-a; PDBTitle: crystal structure of the filamin a repeat 21 complexed with2 the integrin beta2 cytoplasmic tail peptide 69 d1l8qa2 not modelled 7.7 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 70 d1u04a1 not modelled 7.6 55 Fold:SH3-like barrel Superfamily:PAZ domain Family:PAZ domain 71 d1z3eb1 not modelled 7.6 19 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 72 c1th1C_ not modelled 7.4 33 PDB header:cell adhesion/antitumor protein Chain: C: PDB Molecule:adenomatous polyposis coli protein; PDBTitle: beta-catenin in complex with a phosphorylated apc 20aa2 repeat fragment 73 d2hi3a1 not modelled 7.2 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 74 d2b5aa1 not modelled 7.2 18 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 75 d2ccaa2 not modelled 7.2 23 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 76 d2hddb_ not modelled 7.2 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 77 d1xr4a2 not modelled 7.1 17 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 78 c2vt2A_ not modelled 6.8 14 PDB header:transcription Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: structure and functional properties of the bacillus2 subtilis transcriptional repressor rex 79 c1dlyA_ not modelled 6.7 19 PDB header:oxygen storage/transport Chain: A: PDB Molecule:hemoglobin; PDBTitle: x-ray crystal structure of hemoglobin from the green2 unicellular alga chlamydomonas eugametos 80 d1dlya_ not modelled 6.7 19 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 81 c3clcC_ not modelled 6.6 16 PDB header:transcription regulator/dna Chain: C: PDB Molecule:regulatory protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator 82 d2b3na1 not modelled 6.6 26 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:MaoC-like 83 c2ds4A_ not modelled 6.3 32 PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 45; PDBTitle: solution structure of the filamin domain from human2 tripartite motif protein 45 84 c1htjF_ not modelled 6.2 19 PDB header:signaling protein Chain: F: PDB Molecule:kiaa0380; PDBTitle: structure of the rgs-like domain from pdz-rhogef 85 d1htjf_ not modelled 6.2 19 Fold:Regulator of G-protein signaling, RGS Superfamily:Regulator of G-protein signaling, RGS Family:Regulator of G-protein signaling, RGS 86 c1t73B_ not modelled 6.2 100 PDB header:hormone/growth factor receptor Chain: B: PDB Molecule:fxxff motif peptide; PDBTitle: crystal structure of the androgen receptor ligand binding2 domain in complex with a fxxff motif 87 d1rfya_ not modelled 6.1 29 Fold:Long alpha-hairpin Superfamily:Transcriptional repressor TraM Family:Transcriptional repressor TraM 88 d1cooa_ not modelled 6.1 24 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 89 d1ub2a1 not modelled 6.1 30 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 90 c2jxuA_ not modelled 6.0 19 PDB header:unknown function Chain: A: PDB Molecule:terb; PDBTitle: nmr solution structure of kp-terb, a tellurite resistance2 protein from klebsiella pneumoniae 91 c3s93B_ not modelled 6.0 24 PDB header:transcription Chain: B: PDB Molecule:tudor domain-containing protein 5; PDBTitle: crystal structure of conserved motif in tdrd5 92 d1lb2b_ not modelled 5.9 24 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 93 d2di8a1 not modelled 5.8 36 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 94 d1yqea1 not modelled 5.8 13 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 95 d1xnya1 not modelled 5.7 25 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 96 d2ozbb1 not modelled 5.6 13 Fold:Nop domain Superfamily:Nop domain Family:Nop domain 97 c1wao4_ not modelled 5.6 19 PDB header:hydrolase Chain: 4: PDB Molecule:serine/threonine protein phosphatase 5; PDBTitle: pp5 structure 98 d1k8rb_ not modelled 5.6 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 99 d1biaa1 not modelled 5.6 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Biotin repressor-like