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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2o01L_ | PDB header: photosynthesis | Chain: L: PDB Molecule: photosystem i reaction center subunit xi, | PDBTitle: the structure of a plant photosystem i supercomplex at 3.42 angstrom resolution |
Added to library: Tue Mar 16 13:38:30 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | K | P | T | Y | Q | V | I | Q | P | L | N | G | D | P | F | I | G | G | L | E | T | P | V | T | S | S | P | L | I | A | W | Y | L | S | N | L | P | A | Y | R | T | A | V | N | P | L | L | R | G | V | E | V | G | L | A | H | G | F | L | L | V | G | P | F | V | K | A | G | P | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | T | T | S | S | T | T | T | S | T | T | T | T | T | G | G | G | T | S | S | S | S | S | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | R | N | T | E | Y | A | G | A | A | G | S | L | A | A | A | G | L | V | V | I | L | S | M | C | L | T | M | Y | G | I | A | S | F | K | E | G | E | P | S | I | A | P | A | L | T | L | T | G | R | K | K | Q | P | D | Q | L | Q | S | A | D | G | W | A | K | F | T | G | G | F | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | S | T | T | S | S | ![]() | ![]() | ![]() | ![]() | T | S | T | T | T | T | T | G | G | G | T | T | T | T | S | S | S | S | S | S | S | S | S | S | S | T | T | T | S | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Sequence | F | G | G | V | S | G | V | T | W | A | C | F | L | M | Y | V | L | D | L | P | Y | Y | F | K | ||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S |
Download: | PDB structure | FASTA sequence |
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