Fold library entry viewer: c1slyA_

Added to library: Tue Mar 16 12:26:43 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	L	D	E	Q	R	S	R	Y	A	Q	I	K	Q	A	W	D	N	R	Q	M	D	V	V	E	Q	M	M	P	G	L	K	D	Y	P	L	Y	P	Y	L	E	Y	R	Q	I	T	D	D	L	M	N	Q	P	A	V	T	V	T	N	F	V	R	A	N	P	T	L	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T									G	G	G	G	G	G	S	T	T												T	G	G	G														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	R	T	L	Q	S	R	F	V	N	E	L	A	R	R	E	D	W	R	G	L	L	A	F	S	P	E	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E	A	W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T											S			S	S														T	T														S		S	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	F	S	V	W	R	A	S	G	K	Q	D	P	L	A	Y	L	E	R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T	V	L	T	F	A	R	T	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S															T	T											S			T	T	T	G	G	G											G	G	G						T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	D	F	T	R	Q	M	A	A	V	A	F	A	S	V	A	R	Q	D	A	E	N	A	R	L	M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	Q	I	Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		T	T															G	G	G		S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	S	Q	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A	K	E	K	D	E	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q	Q	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																T	T	T											T	S		T	T	G	G	G	S														T	T													T	T	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	Y	P	M	V	A	A	Q	R	I	G	E	E	Y	E	L	K	I	D	K	A	P	Q	N	V	D	S	A	L	T	Q	G	P	E	M	A	R	V	R	E	L	M	Y	W	N	L	D	N	T	A	R	S	E	W	A	N	L	V	K	S	K	S	K	T	E	Q	A	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T												S									S												T	T														T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	Y	A	F	N	N	Q	W	W	D	L	S	V	Q	A	T	I	A	G	K	L	W	D	H	L	E	E	R	F	P	L	A	Y	N	D	L	F	K	R	Y	T	S	G	K	E	I	P	Q	S	Y	A	M	A	I	A	R	Q	E	S	A	W	N	P	K	V	K	S	P	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T												T	T		T	T						S			T	T										T	S	S	S														T	T		T	T		B		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	S	G	L	M	Q	I	M	P	G	T	A	T	H	T	V	K	M	F	S	I	P	G	Y	S	S	P	G	Q	L	L	D	P	E	T	N	I	N	I	G	T	S	Y	L	Q	Y	V	Y	Q	Q	F	G	N	N	R	I	F	S	S	A	A	Y	N	A	G	L	G	R	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	T	T	B												T	T		S				S	G	G	G	G	G	S																			T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Sequence	T	W	L	G	N	S	A	G	R	I	D	A	V	A	F	V	E	S	I	P	F	S	E	T	R	G	Y	V	K	N	V	L	A	Y	D	A	Y	Y	R	Y	F	M	G	D	K	P	T	L	M	S	A	T	E	W	G	R	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S								T		S																						T	T	S				S	S							S

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PDB structure

FASTA sequence

Hidden Markov model

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