Email l.a.kelley@imperial.ac.uk Description P76119 Date Thu Jan 5 12:19:12 GMT 2012 Unique Job ID 54f5ff49bec59528

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1b7ea_ 98.1 11 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Transposase inhibitor (Tn5 transposase) 2 d1musa_ 98.0 14 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Transposase inhibitor (Tn5 transposase) 3 d2v9va2 79.2 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 4 c2v9vA_ 66.0 16 PDB header:transcription Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: crystal structure of moorella thermoacetica selb(377-511) 5 d2ezha_ 52.4 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 6 d2ezia_ 49.6 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 7 c3hefB_ 39.9 17 PDB header:viral protein Chain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit 8 c6paxA_ 36.1 27 PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions 9 c2kzvA_ 29.9 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of cv_0373(175-257) protein from2 chromobacterium violaceum, northeast structural genomics consortium3 target cvr118a 10 c2vp8A_ 24.3 19 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase 2; PDBTitle: structure of mycobacterium tuberculosis rv1207 11 d1osna_ 20.4 7 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 12 c2plyB_ 19.1 16 PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. 13 c3nswA_ 17.5 70 PDB header:immune system Chain: A: PDB Molecule:excretory-secretory protein 2; PDBTitle: crystal structure of ancylostoma ceylanicum excretory-secretory2 protein 2 14 c3a52A_ 17.1 15 PDB header:hydrolase Chain: A: PDB Molecule:cold-active alkaline phosphatase; PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp. 15 d1ajza_ 16.1 11 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 16 c3e2dB_ 15.9 12 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase 17 c3mx7A_ 15.3 17 PDB header:apoptosis Chain: A: PDB Molecule:fas apoptotic inhibitory molecule 1; PDBTitle: crystal structure analysis of human faim-ntd 18 d3orca_ 14.4 21 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 19 c2y5sA_ 14.4 17 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. 20 d1pdnc_ 13.6 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 21 d1iyxa1 not modelled 13.3 25 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase 22 c3r1iB_ not modelled 13.1 25 PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum 23 c1hj0A_ not modelled 12.2 25 PDB header:actin binding peptide Chain: A: PDB Molecule:thymosin beta9; PDBTitle: thymosin beta9 24 d1eyea_ not modelled 11.5 19 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 25 d1dlwa_ not modelled 10.5 13 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 26 c2iucB_ not modelled 10.0 23 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 27 d1uuza_ not modelled 9.7 15 Fold:Inhibitor of vertebrate lysozyme, Ivy Superfamily:Inhibitor of vertebrate lysozyme, Ivy Family:Inhibitor of vertebrate lysozyme, Ivy 28 d1d1la_ not modelled 9.6 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 29 d2hxja1 not modelled 9.5 14 Fold:FinO-like Superfamily:FinO-like Family:FinO-like 30 d2gm3a1 not modelled 9.5 13 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 31 c3rf7A_ not modelled 9.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:iron-containing alcohol dehydrogenase; PDBTitle: crystal structure of an iron-containing alcohol dehydrogenase2 (sden_2133) from shewanella denitrificans os-217 at 2.12 a resolution 32 c3emkA_ not modelled 9.1 21 PDB header:oxidoreductase Chain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis 33 d2a22a1 not modelled 9.1 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 34 d2fgga1 not modelled 9.0 31 Fold:dsRBD-like Superfamily:Rv2632c-like Family:Rv2632c-like 35 c2kvcA_ not modelled 8.8 27 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a 36 d1mpga1 not modelled 8.8 8 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:DNA repair glycosylase, 2 C-terminal domains 37 c3douA_ not modelled 8.8 20 PDB header:transferase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase j; PDBTitle: crystal structure of methyltransferase involved in cell2 division from thermoplasma volcanicum gss1 38 c2pijB_ not modelled 8.6 16 PDB header:transcription Chain: B: PDB Molecule:prophage pfl 6 cro; PDBTitle: structure of the cro protein from prophage pfl 6 in pseudomonas2 fluorescens pf-5 39 d4croa_ not modelled 8.3 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 40 c3pk0B_ not modelled 8.3 12 PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of short-chain dehydrogenase/reductase sdr from2 mycobacterium smegmatis 41 d1e8qa_ not modelled 8.2 13 Fold:Cellulose docking domain, dockering Superfamily:Cellulose docking domain, dockering Family:Cellulose docking domain, dockering 42 d2ezla_ not modelled 8.1 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 43 d1vi7a1 not modelled 8.0 19 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:YigZ N-terminal domain-like 44 d1xb4a2 not modelled 7.8 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 45 c2rfpA_ not modelled 7.8 10 PDB header:hydrolase Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase; PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution 46 c3gk0H_ not modelled 7.2 24 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 47 c2z1nA_ not modelled 7.1 24 PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of ape0912 from aeropyrum pernix k1 48 d3bpya1 not modelled 7.0 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 49 d1s69a_ not modelled 7.0 20 Fold:Globin-like Superfamily:Globin-like Family:Truncated hemoglobin 50 c2hxjF_ not modelled 7.0 14 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein of unknown function nmb1681 from2 neisseria meningitidis mc58, possible nucleic acid binding protein 51 d1cyda_ not modelled 7.0 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 52 d2c6ya1 not modelled 6.8 3 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 53 d2ptza1 not modelled 6.8 20 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase 54 c3l1pA_ not modelled 6.7 17 PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex 55 c1c94B_ not modelled 6.7 38 PDB header:gene regulation Chain: B: PDB Molecule:retro-gcn4 leucine zipper; PDBTitle: reversing the sequence of the gcn4 leucine zipper does not2 affect its fold. 56 c3aq8A_ not modelled 6.5 13 PDB header:oxygen binding Chain: A: PDB Molecule:group 1 truncated hemoglobin; PDBTitle: crystal structure of truncated hemoglobin from tetrahymena pyriformis,2 q46e mutant, fe(iii) form 57 c3ol4B_ not modelled 6.5 35 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 58 c3ak4C_ not modelled 6.4 13 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens 59 c2wdzD_ not modelled 6.4 18 PDB header:oxidoreductase Chain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol 60 d2czda1 not modelled 6.3 22 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Decarboxylase 61 c1e17A_ not modelled 6.3 7 PDB header:dna binding domain Chain: A: PDB Molecule:afx; PDBTitle: solution structure of the dna binding domain of the human2 forkhead transcription factor afx (foxo4) 62 c3cxtA_ not modelled 6.2 24 PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2 63 d1w6ta1 not modelled 6.2 24 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase 64 c3b9nB_ not modelled 6.0 15 PDB header:oxidoreductase Chain: B: PDB Molecule:alkane monoxygenase; PDBTitle: crystal structure of long-chain alkane monooxygenase (lada) 65 c2kl8A_ not modelled 6.0 22 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 66 d1l1ya_ not modelled 6.0 57 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Cellulases catalytic domain 67 c1l2aD_ not modelled 6.0 57 PDB header:hydrolase Chain: D: PDB Molecule:cellobiohydrolase; PDBTitle: the crystal structure and catalytic mechanism of2 cellobiohydrolase cels, the major enzymatic component of3 the clostridium thermocellum cellulosome 68 c1qcrD_ not modelled 5.9 6 PDB header: PDB COMPND: 69 d1g31a_ not modelled 5.8 20 Fold:GroES-like Superfamily:GroES-like Family:GroES 70 c3gdfA_ not modelled 5.6 18 PDB header:oxidoreductase Chain: A: PDB Molecule:probable nadp-dependent mannitol dehydrogenase; PDBTitle: crystal structure of the nadp-dependent mannitol dehydrogenase from2 cladosporium herbarum. 71 d2abka_ not modelled 5.4 13 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:Endonuclease III 72 c2o2sA_ not modelled 5.4 13 PDB header:oxidoreductase Chain: A: PDB Molecule:enoyl-acyl carrier reductase; PDBTitle: the structure of t. gondii enoyl acyl carrier protein reductase in2 complex with nad and triclosan 73 d1m5wa_ not modelled 5.4 24 Fold:TIM beta/alpha-barrel Superfamily:Pyridoxine 5'-phosphate synthase Family:Pyridoxine 5'-phosphate synthase 74 c3cwbQ_ not modelled 5.3 5 PDB header:oxidoreductase Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d 75 c1htrP_ not modelled 5.3 20 PDB header:aspartyl protease Chain: P: PDB Molecule:progastricsin (pro segment); PDBTitle: crystal and molecular structures of human progastricsin at 1.622 angstroms resolution 76 d1un2a_ not modelled 5.2 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 77 c3co7C_ not modelled 5.2 11 PDB header:transcription/dna Chain: C: PDB Molecule:forkhead box protein o1; PDBTitle: crystal structure of foxo1 dbd bound to dbe2 dna 78 d2giab1 not modelled 5.2 50 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Guide RNA binding protein gBP 79 c2giaB_ not modelled 5.2 50 PDB header:translation Chain: B: PDB Molecule:mitochondrial rna-binding protein 1; PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2 80 d2i7pa1 not modelled 5.2 23 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 81 c3gafF_ not modelled 5.1 15 PDB header:oxidoreductase Chain: F: PDB Molecule:7-alpha-hydroxysteroid dehydrogenase; PDBTitle: 2.2a crystal structure of 7-alpha-hydroxysteroid2 dehydrogenase from brucella melitensis 82 d2c4ka1 not modelled 5.1 23 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 83 c3hluA_ not modelled 5.1 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf2179; PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 duf2179 from eubacterium ventriosum 84 c2bmbA_ not modelled 5.1 20 PDB header:transferase Chain: A: PDB Molecule:folic acid synthesis protein fol1; PDBTitle: x-ray structure of the bifunctional 6-hydroxymethyl-7,8-2 dihydroxypterin pyrophosphokinase dihydropteroate synthase3 from saccharomyces cerevisiae 85 d1gpqa_ not modelled 5.1 16 Fold:Inhibitor of vertebrate lysozyme, Ivy Superfamily:Inhibitor of vertebrate lysozyme, Ivy Family:Inhibitor of vertebrate lysozyme, Ivy 86 d2o23a1 not modelled 5.1 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 87 c2x4mD_ not modelled 5.1 27 PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla 88 d1g9ga_ not modelled 5.0 26 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Cellulases catalytic domain