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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3l1pA_

Fold library idPDB HeaderMoleculeTitle
c3l1pA_PDB header: transcription/dnaChain: A: PDB Molecule: pou domain, class 5, transcription factor 1;PDBTitle: pou protein:dna complex


Added to library: Sat Dec 18 18:31:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTISRFEALQLSLKNMSKLRPLLEKW
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Known secondary structure (DSSP)
TT

S



TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEEADNNENLQEISKSVQARKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDVVRVWFSN
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Known secondary structure (DSSP) TT
SS




S







TTTTT
S


TT

 .......
Sequence RRQKGKR
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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