PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3ak4C_

Fold library id	PDB Header	Molecule	Title
c3ak4C_	PDB header: oxidoreductase	Chain: C: PDB Molecule: nadh-dependent quinuclidinone reductase;	PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens

Links to external resources
Added to library: Sat Jul 16 10:14:20 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G I F D L S G R K A I V T G G S K G I G A A I A R A L D K A G A T V A I A D L D V M A A Q A V V A G L E N G G F A V E V D V T K R A S V D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T T S T T
S
T
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A M Q K A I D A L G G F D L L C A N A G V S T M R P A V D I T D E E W D F N F D V N A R G V F L A N Q I A C R H F L A S N T K G V I V N T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L A A K V G A P L L A H Y S A S K F A V F G W T Q A L A R E M A P K N I R V N C V C P G F V K T A M Q E R E I I W E A E L R G M T P E A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T S
T T
G G G T
S B
S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . .

Sequence R A E Y V S L T P L G R I E E P E D V A D V V V F L A S D A A R F M T G Q G I N V T G G V R M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
B
S G G G T T
S
S S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	F	D	L	S	G	R	K	A	I	V	T	G	G	S	K	G	I	G	A	A	I	A	R	A	L	D	K	A	G	A	T	V	A	I	A	D	L	D	V	M	A	A	Q	A	V	V	A	G	L	E	N	G	G	F	A	V	E	V	D	V	T	K	R	A	S	V	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			T	T							T	T	T	S													T	T								S											T		T	T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	M	Q	K	A	I	D	A	L	G	G	F	D	L	L	C	A	N	A	G	V	S	T	M	R	P	A	V	D	I	T	D	E	E	W	D	F	N	F	D	V	N	A	R	G	V	F	L	A	N	Q	I	A	C	R	H	F	L	A	S	N	T	K	G	V	I	V	N	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S																G	G	G														T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	A	A	K	V	G	A	P	L	L	A	H	Y	S	A	S	K	F	A	V	F	G	W	T	Q	A	L	A	R	E	M	A	P	K	N	I	R	V	N	C	V	C	P	G	F	V	K	T	A	M	Q	E	R	E	I	I	W	E	A	E	L	R	G	M	T	P	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	S			T	T																							G	G	G	T										S	B		S															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Sequence	R	A	E	Y	V	S	L	T	P	L	G	R	I	E	E	P	E	D	V	A	D	V	V	V	F	L	A	S	D	A	A	R	F	M	T	G	Q	G	I	N	V	T	G	G	V	R	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		T	T		S		B														S	G	G	G	T	T			S						S	S	S	S	S