Fold library entry viewer: d1l1ya_

Added to library: Tue Mar 16 13:57:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	T	K	A	P	T	K	D	G	T	S	Y	K	D	L	F	L	E	L	Y	G	K	I	K	D	P	K	N	G	Y	F	S	P	D	E	G	I	P	Y	H	S	I	E	T	L	I	V	E	A	P	D	Y	G	H	V	T	T	S	E	A	F	S	Y	Y	V	W	L	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						T	T		B															G	G	G		S	B		T	T	T			B		S	B	S		S				S	S	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	Y	G	N	L	T	G	N	W	S	G	V	E	T	A	W	K	V	M	E	D	W	I	I	P	D	S	T	E	Q	P	G	M	S	S	Y	N	P	N	S	P	A	T	Y	A	D	E	Y	E	D	P	S	Y	Y	P	S	E	L	K	F	D	T	V	R	V	G	S	D	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S																T	S			S	T	T	S	T	T	G	G	G		B	T	T	B									S	S	G	G	G		S					T	T	T							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	N	D	L	V	S	A	Y	G	P	N	M	Y	L	M	H	W	L	M	D	V	D	N	W	Y	G	F	G	T	G	T	R	A	T	F	I	N	T	F	Q	R	G	E	Q	E	S	T	W	E	T	I	P	H	P	S	I	E	E	F	K	Y	G	G	P	N	G	F	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S						S				T	T		T	T			S	S	T	T										S		T	T			S	S	S						S				S	S	S	B	B	T	T	B	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	T	K	D	R	S	Y	A	K	Q	W	R	Y	T	N	A	P	D	A	E	G	R	A	I	Q	A	V	Y	W	A	N	K	W	A	K	E	Q	G	K	G	S	A	V	A	S	V	V	S	K	A	A	K	M	G	D	F	L	R	N	D	M	F	D	K	Y	F	M	K	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																															T	T		G	G	G	T														G	G	G	G	G	B		T	T		B		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Q	D	K	T	P	A	T	G	Y	D	S	A	H	Y	L	M	A	W	Y	T	A	W	G	G	G	I	G	A	S	W	A	W	K	I	G	C	S	H	A	H	F	G	Y	Q	N	P	F	Q	G	W	V	S	A	T	Q	S	D	F	A	P	K	S	S	N	G	K	R	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			B		S	S	S	T	T	B			S		B	S								S	S	S									S				G	G	G													G	G	G			S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	T	S	Y	K	R	Q	L	E	F	Y	Q	W	L	Q	S	A	E	G	G	I	A	G	G	A	T	N	S	W	N	G	R	Y	E	K	Y	P	A	G	T	S	T	F	Y	G	M	A	Y	V	P	H	P	V	Y	A	D	P	G	S	N	Q	W	F	G	F	Q	A	W	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															B		S	S	S		B						S	S	B	T	T	T	T	B				T	T					T	T					S	S		S		B	T	T	B	T	T		B	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	R	V	M	E	Y	Y	L	E	T	G	D	S	S	V	K	N	L	I	K	K	W	V	D	W	V	M	S	E	I	K	L	Y	D	D	G	T	F	A	I	P	S	D	L	E	W	S	G	Q	P	D	T	W	T	G	T	Y	T	G	N	P	N	L	H	V	R	V	T	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G													T	T					T	T	S												S							S	S					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	T	D	L	G	V	A	G	S	L	A	N	A	L	A	T	Y	A	A	A	T	E	R	W	E	G	K	L	D	T	K	A	R	D	M	A	A	E	L	V	N	R	A	W	Y	N	F	Y	C	S	E	G	K	G	V	V	T	E	E	A	R	A	D	Y	K	R	F	F	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S	S	S																					B		T	T	S	S	S	B							G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	V	Y	V	P	A	G	W	S	G	T	M	P	N	G	D	K	I	Q	P	G	I	K	F	I	D	I	R	T	K	Y	R	Q	D	P	Y	Y	D	I	V	Y	Q	A	Y	L	R	G	E	A	P	V	L	N	Y	H	R	F	W	H	E	V	D	L	A	V	A	M	G	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					T	T						T	T	S					T	T		B	G	G	G	G		G	G	G	G	G	S	T	T										T	T									B
	.	.	.	.	.	.	.	.	.	640	.	.
Sequence	A	T	Y	F	P	D	M	T	Y	K	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		B

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PDB structure

FASTA sequence

Hidden Markov model

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