Email l.a.kelley@imperial.ac.uk Description P39396 Date Thu Jan 5 12:00:30 GMT 2012 Unique Job ID 52a805885754a109

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3giaA_ 98.0 14 PDB header:transport protein Chain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter 2 c2xq2A_ 97.4 16 PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt 3 c2jlnA_ 97.2 14 PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter 4 c3dh4A_ 88.3 15 PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus 5 c3lrcC_ 82.6 13 PDB header:transport protein Chain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1) 6 c3a8qB_ 31.6 70 PDB header:signaling protein Chain: B: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: low-resolution crystal structure of the tiam2 phccex domain 7 c3a8nA_ 29.7 58 PDB header:signaling protein Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: crystal structure of the tiam1 phccex domain 8 c3pl0B_ 21.5 33 PDB header:biosynthetic protein Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a bsma homolog (mpe_a2762) from methylobium2 petroleophilum pm1 at 1.91 a resolution 9 d1rp4a_ 17.7 41 Fold:ERO1-like Superfamily:ERO1-like Family:ERO1-like 10 c3hd6A_ 16.3 11 PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg 11 c2jp3A_ 14.1 16 PDB header:transcription Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles 12 c3b9yA_ 12.3 14 PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein 13 c2k9pA_ 12.3 24 PDB header:membrane protein Chain: A: PDB Molecule:pheromone alpha factor receptor; PDBTitle: structure of tm1_tm2 in lppg micelles 14 d2axtj1 11.5 21 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein J, PsbJ Family:PsbJ-like 15 d2bfdb2 11.4 8 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 16 c3ahrA_ 10.6 56 PDB header:oxidoreductase Chain: A: PDB Molecule:ero1-like protein alpha; PDBTitle: inactive human ero1 17 d2awia1 10.5 41 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:PrgX N-terminal domain-like 18 c3chxE_ 9.7 40 PDB header:membrane protein Chain: E: PDB Molecule:pmob; PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo) 19 d1qs0b2 9.2 19 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 20 d1h5pa_ 9.2 27 Fold:SAND domain-like Superfamily:SAND domain-like Family:SAND domain 21 d1oqja_ not modelled 9.2 27 Fold:SAND domain-like Superfamily:SAND domain-like Family:SAND domain 22 d1afra_ not modelled 9.1 30 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 23 d2fug61 not modelled 9.0 31 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nq06-like 24 d1s6la1 not modelled 8.5 38 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MerB N-terminal domain-like 25 d1ufna_ not modelled 8.4 27 Fold:SAND domain-like Superfamily:SAND domain-like Family:SAND domain 26 c2ktlA_ not modelled 8.1 16 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of c-terminal domain from mttyrrs of a. nidulans 27 d2etja1 not modelled 8.0 67 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 28 c2etjA_ not modelled 8.0 67 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease hii; PDBTitle: crystal structure of ribonuclease hii (ec 3.1.26.4) (rnase hii)2 (tm0915) from thermotoga maritima at 1.74 a resolution 29 c2jo1A_ not modelled 7.8 8 PDB header:hydrolase regulator Chain: A: PDB Molecule:phospholemman; PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles 30 c3iymA_ not modelled 7.8 35 PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: backbone trace of the capsid protein dimer of a fungal partitivirus2 from electron cryomicroscopy and homology modeling 31 d1ik6a2 not modelled 7.5 19 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 32 d2ozlb2 not modelled 7.0 14 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 33 d5csma_ not modelled 6.9 16 Fold:Chorismate mutase II Superfamily:Chorismate mutase II Family:Allosteric chorismate mutase 34 c3pppA_ not modelled 6.5 11 PDB header:transport protein Chain: A: PDB Molecule:glycine betaine/carnitine/choline-binding protein; PDBTitle: structures of the substrate-binding protein provide insights into the2 multiple compatible solutes binding specificities of bacillus3 subtilis abc transporter opuc 35 c1i3aA_ not modelled 6.3 56 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease hii; PDBTitle: rnase hii from archaeoglobus fulgidus with cobalt hexammine2 chloride 36 d1i39a_ not modelled 6.3 56 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 37 d1ekea_ not modelled 6.3 67 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 38 c3kioA_ not modelled 5.9 67 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h2 subunit a; PDBTitle: mouse rnase h2 complex 39 c2qx5B_ not modelled 5.8 12 PDB header:transport protein Chain: B: PDB Molecule:nucleoporin nic96; PDBTitle: structure of nucleoporin nic96 40 d1uaxa_ not modelled 5.8 67 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 41 c3zy6A_ not modelled 5.8 20 PDB header:transferase Chain: A: PDB Molecule:putative gdp-fucose protein o-fucosyltransferase 1; PDBTitle: crystal structure of pofut1 in complex with gdp-fucose2 (crystal-form-ii) 42 c2k42A_ not modelled 5.7 15 PDB header:signaling protein Chain: A: PDB Molecule:wiskott-aldrich syndrome protein; PDBTitle: solution structure of the gtpase binding domain of wasp in2 complex with espfu, an ehec effector 43 d1w85b2 not modelled 5.6 34 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 44 c2d0bA_ not modelled 5.5 44 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease hiii; PDBTitle: crystal structure of bst-rnase hiii in complex with mg2+ 45 d1io2a_ not modelled 5.5 67 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Ribonuclease H 46 d1llda2 not modelled 5.4 29 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 47 d1i0za2 not modelled 5.4 25 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 48 c2elnA_ not modelled 5.4 38 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 11th c2h2 zinc finger of human2 zinc finger protein 406 49 d9ldta2 not modelled 5.4 25 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 50 d2yrka1 not modelled 5.3 36 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger 51 c2lbfA_ not modelled 5.3 43 PDB header:ribosomal protein Chain: A: PDB Molecule:60s acidic ribosomal protein p1; PDBTitle: solution structure of the dimerization domain of human ribosomal2 protein p1/p2 heterodimer 52 d1nekd_ not modelled 5.3 11 Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)