Email l.a.kelley@imperial.ac.uk Description P39099 Date Thu Jan 5 11:58:15 GMT 2012 Unique Job ID 48c4b348130cd810

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c4a8aI_ 100.0 98 PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme 2 c3pv5B_ 100.0 45 PDB header:hydrolase Chain: B: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (n189g/p190g variant) 3 c3stjC_ 100.0 100 PDB header:hydrolase Chain: C: PDB Molecule:protease degq; PDBTitle: crystal structure of the protease + pdz1 domain of degq from2 escherichia coli 4 c1ky9A_ 100.0 63 PDB header:hydrolase Chain: A: PDB Molecule:protease do; PDBTitle: crystal structure of degp (htra) 5 c3pv4A_ 100.0 51 PDB header:hydrolase Chain: A: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (delta-pdz2 variant) 6 c3gdsA_ 100.0 42 PDB header:hydrolase/hydrolase activator Chain: A: PDB Molecule:protease degs; PDBTitle: crystal structure of degs h198p/d320a mutant modified by dfp in2 complex with dnrdgnvyyf peptide 7 c3qo6B_ 100.0 37 PDB header:photosynthesis Chain: B: PDB Molecule:protease do-like 1, chloroplastic; PDBTitle: crystal structure analysis of the plant protease deg1 8 c2z9iB_ 100.0 42 PDB header:hydrolase Chain: B: PDB Molecule:probable serine protease pepd; PDBTitle: crystal structure of rv0983 from mycobacterium tuberculosis-2 proteolytically active form 9 c1lcyA_ 100.0 34 PDB header:hydrolase Chain: A: PDB Molecule:htra2 serine protease; PDBTitle: crystal structure of the mitochondrial serine protease htra2 10 c2r3yC_ 100.0 46 PDB header:hydrolase/hydrolase activator Chain: C: PDB Molecule:protease degs; PDBTitle: crystal structure of the degs protease in complex with the2 ywf activating peptide 11 d1ky9a2 100.0 64 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 12 d1l1ja_ 100.0 42 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 13 c2rceI_ 100.0 47 PDB header:hydrolase Chain: I: PDB Molecule:protease degs; PDBTitle: dfp modified degs delta pdz 14 c3stiC_ 100.0 100 PDB header:hydrolase Chain: C: PDB Molecule:protease degq; PDBTitle: crystal structure of the protease domain of degq from escherichia coli 15 d2qf3a1 100.0 52 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 16 c3nziA_ 100.0 43 PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 17 d2z9ia2 100.0 47 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 18 d1lcya2 100.0 39 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 19 c3nwuB_ 100.0 45 PDB header:hydrolase Chain: B: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 20 c3k6zA_ 100.0 26 PDB header:hydrolase Chain: A: PDB Molecule:possible membrane-associated serine protease; PDBTitle: crystal structure of rv3671c protease, inactive form 21 c3mmgB_ not modelled 99.9 16 PDB header:viral protein, hydrolase Chain: B: PDB Molecule:nuclear inclusion protein a; PDBTitle: crystal structure of tobacco vein mottling virus protease 22 c1zyoA_ not modelled 99.9 14 PDB header:hydrolase Chain: A: PDB Molecule:serine protease; PDBTitle: crystal structure of the serine protease domain of sesbania mosaic2 virus polyprotein 23 d1q31a_ not modelled 99.9 16 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 24 c2w5eB_ not modelled 99.9 18 PDB header:hydrolase Chain: B: PDB Molecule:putative serine protease; PDBTitle: structural and biochemical analysis of human pathogenic2 astrovirus serine protease at 2.0 angstrom resolution 25 d1lvmb_ not modelled 99.9 17 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 26 d1qtfa_ not modelled 99.9 26 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 27 c2qt5A_ not modelled 99.9 18 PDB header:peptide binding protein Chain: A: PDB Molecule:glutamate receptor-interacting protein 1; PDBTitle: crystal structure of grip1 pdz12 in complex with the fras12 peptide 28 c1p1dA_ not modelled 99.9 18 PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins 29 d1agja_ not modelled 99.9 23 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 30 c2ka9A_ not modelled 99.9 20 PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide 31 c3rleA_ not modelled 99.9 21 PDB header:membrane protein Chain: A: PDB Molecule:golgi reassembly-stacking protein 2; PDBTitle: crystal structure of grasp55 grasp domain (residues 7-208) 32 c3r0hA_ not modelled 99.8 16 PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide 33 c2vidA_ not modelled 99.8 21 PDB header:hydrolase Chain: A: PDB Molecule:serine protease splb; PDBTitle: serine protease splb from staphylococcus aureus at 1.8a2 resolution 34 c2xkxB_ not modelled 99.8 20 PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain 35 c1w9qB_ not modelled 99.8 23 PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the pdz tandem of human syntenin in2 complex with tnefaf peptide 36 c1u3bA_ not modelled 99.8 19 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 37 c2w7uC_ not modelled 99.8 20 PDB header:hydrolase Chain: C: PDB Molecule:serine protease spla; PDBTitle: spla serine protease of staphylococcus aureus (2.4a) 38 d1cqqa_ not modelled 99.8 17 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 39 c2b0fA_ not modelled 99.8 20 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:picornain 3c (protease 3c) (p3c); PDBTitle: nmr structure of the human rhinovirus 3c protease (serotype 14) with2 covalently bound ace-lealfq-ethylpropionate inhibitor 40 c2as9B_ not modelled 99.8 24 PDB header:hydrolase Chain: B: PDB Molecule:serine protease; PDBTitle: functional and structural characterization of spl proteases2 from staphylococcus aureus 41 d1l1na_ not modelled 99.7 18 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 42 d2qaaa1 not modelled 99.7 20 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 43 c2ouaA_ not modelled 99.7 17 PDB header:hydrolase Chain: A: PDB Molecule:serine protease; PDBTitle: crystal structure of nocardiopsis protease (napase) 44 d2h5ca1 not modelled 99.7 17 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 45 d1ky9a1 not modelled 99.7 60 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 46 c2joaA_ not modelled 99.6 21 PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances 47 c2o8lA_ not modelled 99.6 22 PDB header:hydrolase Chain: A: PDB Molecule:v8 protease; PDBTitle: structure of v8 protease from staphylococcus aureus 48 d2o8la1 not modelled 99.6 22 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 49 c2p3wB_ not modelled 99.6 28 PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) 50 d2sfaa_ not modelled 99.6 20 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 51 c1qy6A_ not modelled 99.6 22 PDB header:protease Chain: A: PDB Molecule:serine protease; PDBTitle: structue of v8 protease from staphylococcus aureus 52 d1lcya1 not modelled 99.6 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 53 c2pfeA_ not modelled 99.6 18 PDB header:hydrolase Chain: A: PDB Molecule:alkaline serine protease; PDBTitle: crystal structure of thermobifida fusca protease a (tfpa) 54 d2sgaa_ not modelled 99.6 20 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 55 c1wczA_ not modelled 99.6 24 PDB header:hydrolase Chain: A: PDB Molecule:glutamyl endopeptidase; PDBTitle: crystal structure of an alkaline form of v8 protease from2 staphylococcus aureus 56 d2z9ia1 not modelled 99.5 34 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 57 c1z87A_ not modelled 99.5 15 PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin 58 c2ea3A_ not modelled 99.5 17 PDB header:hydrolase Chain: A: PDB Molecule:chymotrypsin; PDBTitle: crystal structure of cellulomonas bogoriensis chymotrypsin 59 d1hpga_ not modelled 99.5 18 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 60 d1p3ca_ not modelled 99.4 17 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 61 c2krgA_ not modelled 99.4 21 PDB header:signaling protein Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358) 62 d1arba_ not modelled 99.4 14 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 63 c2kl1A_ not modelled 99.4 26 PDB header:protein binding Chain: A: PDB Molecule:ylbl protein; PDBTitle: solution structure of gtr34c from geobacillus thermodenitrificans.2 northeast structural genomics consortium target gtr34c 64 d1ky9b2 not modelled 99.4 48 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 65 c3i18A_ not modelled 99.3 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b 66 d1p1da2 not modelled 99.3 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 67 c2kjdA_ not modelled 99.3 22 PDB header:signaling protein Chain: A: PDB Molecule:sodium/hydrogen exchange regulatory cofactor nhe- PDBTitle: solution structure of extended pdz2 domain from nherf1 (150-2 270) 68 c3eggC_ not modelled 99.3 22 PDB header:hydrolase Chain: C: PDB Molecule:spinophilin; PDBTitle: crystal structure of a complex between protein phosphatase 1 alpha2 (pp1) and the pp1 binding and pdz domains of spinophilin 69 d1ozia_ not modelled 99.3 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 70 d1rgwa_ not modelled 99.3 15 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 71 c2iwnA_ not modelled 99.3 21 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 3rd pdz domain of multiple pdz domain protein mpdz (casp2 target) 72 d1sota1 not modelled 99.3 35 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 73 c3l4fD_ not modelled 99.3 16 PDB header:signaling protein/protein binding Chain: D: PDB Molecule:sh3 and multiple ankyrin repeat domains protein PDBTitle: crystal structure of betapix coiled-coil domain and shank2 pdz complex 74 d1q3oa_ not modelled 99.3 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 75 d2i4sa1 not modelled 99.3 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 76 c2eehA_ not modelled 99.3 22 PDB header:metal binding protein Chain: A: PDB Molecule:pdz domain-containing protein 7; PDBTitle: solution structure of first pdz domain of pdz domain2 containing protein 7 77 c2q3gA_ not modelled 99.3 18 PDB header:structural genomics Chain: A: PDB Molecule:pdz and lim domain protein 7; PDBTitle: structure of the pdz domain of human pdlim7 bound to a c-2 terminal extension from human beta-tropomyosin 78 c2kjpA_ not modelled 99.2 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ylbl; PDBTitle: solution structure of protein ylbl (bsu15050) from bacillus2 subtilis, northeast structural genomics consortium target3 sr713a 79 d1fc6a3 not modelled 99.2 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Tail specific protease PDZ domain 80 c3k1rA_ not modelled 99.2 19 PDB header:structural protein Chain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 81 d1t2ma1 not modelled 99.2 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 82 c2o2tB_ not modelled 99.2 24 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 1st pdz domain of mpdz 83 d1uf1a_ not modelled 99.2 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 84 d1m5za_ not modelled 99.2 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 85 c2dkrA_ not modelled 99.2 25 PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b 86 c2jikB_ not modelled 99.2 23 PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein 87 d1wfga_ not modelled 99.2 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 88 d1x5qa1 not modelled 99.2 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 89 d1qava_ not modelled 99.2 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 90 c2pkuA_ not modelled 99.2 19 PDB header:protein binding Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: solution structure of pick1 pdz in complex with the2 carboxyl tail peptide of glur2 91 d1n7ea_ not modelled 99.2 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 92 d1wf7a_ not modelled 99.2 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 93 c2v1wB_ not modelled 99.2 18 PDB header:structural protein Chain: B: PDB Molecule:pdz and lim domain protein 4; PDBTitle: crystal structure of human lim protein ril (pdlim4) pdz2 domain bound to the c-terminal peptide of human alpha-3 actinin-1 94 d1wjla_ not modelled 99.2 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 95 c2vwrA_ not modelled 99.2 21 PDB header:protein-binding Chain: A: PDB Molecule:ligand of numb protein x 2; PDBTitle: crystal structure of the second pdz domain of numb-binding2 protein 2 96 d1ueqa_ not modelled 99.2 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 97 c2v90E_ not modelled 99.2 26 PDB header:protein-binding Chain: E: PDB Molecule:pdz domain-containing protein 3; PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3) 98 c2iwqA_ not modelled 99.2 18 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 7th pdz domain of multiple pdz domain protein mpdz 99 d2fe5a1 not modelled 99.2 26 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 100 c3hpmA_ not modelled 99.2 21 PDB header:protein binding Chain: A: PDB Molecule:protein interacting with prkca 1; PDBTitle: oxidized dimeric pick1 pdz c46g mutant in complex with the carboxyl2 tail peptide of glur2 101 d1d5ga_ not modelled 99.2 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 102 d1uhpa_ not modelled 99.2 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 103 d1be9a_ not modelled 99.2 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 104 d1vb7a_ not modelled 99.2 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 105 d1g9oa_ not modelled 99.2 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 106 c2jilA_ not modelled 99.2 25 PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) 107 d1pdra_ not modelled 99.2 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 108 d1whaa_ not modelled 99.2 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 109 c2he4A_ not modelled 99.2 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2; PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif 110 d1um1a_ not modelled 99.2 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 111 d1ry4a_ not modelled 99.2 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 112 d2f0aa1 not modelled 99.2 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 113 d1wh1a_ not modelled 99.2 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 114 d2f5ya1 not modelled 99.2 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 115 c2dazA_ not modelled 99.2 19 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the 7th pdz domain of inad-like2 protein 116 c2qg1A_ not modelled 99.2 22 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: crystal structure of the 11th pdz domain of mpdz (mupp1) 117 d2hgaa1 not modelled 99.2 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:MTH1368 C-terminal domain-like 118 c2jxoA_ not modelled 99.2 22 PDB header:protein binding Chain: A: PDB Molecule:ezrin-radixin-moesin-binding phosphoprotein 50; PDBTitle: structure of the second pdz domain of nherf-1 119 d2byga1 not modelled 99.2 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 120 c3diwB_ not modelled 99.1 26 PDB header:signaling protein/cell adhesion Chain: B: PDB Molecule:tax1-binding protein 3; PDBTitle: c-terminal beta-catenin bound tip-1 structure