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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2joaA_

Fold library idPDB HeaderMoleculeTitle
c2joaA_PDB header: protein bindingChain: A: PDB Molecule: serine protease htra1;PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances


Added to library: Tue Mar 16 11:59:37 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHMKKYIGIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSA
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S


B
S


TTS
S


S
SSST

TT

B
SS
B

S
 .........80.........90.........100.....
Sequence NDVSDVIKRESTLNMVVRRGNEDIMITVIPEEIDP
Predicted secondary structure









SS confidence


































Known secondary structure (DSSP)
SSTT

B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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