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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qo6B_

Fold library idPDB HeaderMoleculeTitle
c3qo6B_PDB header: photosynthesisChain: B: PDB Molecule: protease do-like 1, chloroplastic;PDBTitle: crystal structure analysis of the plant protease deg1


Added to library: Sat May 7 09:17:10 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASD
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Known secondary structure (DSSP)




GGG
TTT
STTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGV
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Known secondary structure (DSSP)
TTS
TTTT


GGG




B

STT

TT

GGG
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVG
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Known secondary structure (DSSP)
SSSS

S


TT
TT
TTS


SSSS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITS
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Known secondary structure (DSSP) SS







SSTTGGGT

S

TTSTT




SSS



 .........290.........300.........310.........320........
Sequence VNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKPDE
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Known secondary structure (DSSP) TT
SSTT

TT

SSSB







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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