PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d2o8la1

Fold library id	Fold	Superfamily	Family
d2o8la1	Trypsin-like serine proteases	Trypsin-like serine proteases	Prokaryotic proteases

Links to external resources
Added to library: Tue Mar 16 12:53:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V I L P N N D R H Q I T D T T N G H Y A P V T Y I Q V E A P T G T F I A S G V V V G K D T L L T N K H V V D A T H G D P H A L K A F P S A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T T S G G G T T T T T T
T T T T
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N Q D N Y P N G G F T A E Q I T K Y S G E G D L A I V K F S P N E Q N K H I G E V V K P A T M S N N A E T Q T N Q N I T V T G Y P G D K P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T B
T T
S S S S
T T S
T T T S S
T T
T T
T T S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T M W E S K G K I T Y L K G E A M Q Y D L S T T G G N S G S P V F N E K N E V I G I H W G G V P N E F N G A V F I N E N V R N F L K Q N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T
T T
T T S
T T T

. . . . . .

Sequence E D I N F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	I	L	P	N	N	D	R	H	Q	I	T	D	T	T	N	G	H	Y	A	P	V	T	Y	I	Q	V	E	A	P	T	G	T	F	I	A	S	G	V	V	V	G	K	D	T	L	L	T	N	K	H	V	V	D	A	T	H	G	D	P	H	A	L	K	A	F	P	S	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S								S	S	T	T	S	G	G	G	T	T									T	T												T	T											T	T	T	T		G	G	G						T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	Q	D	N	Y	P	N	G	G	F	T	A	E	Q	I	T	K	Y	S	G	E	G	D	L	A	I	V	K	F	S	P	N	E	Q	N	K	H	I	G	E	V	V	K	P	A	T	M	S	N	N	A	E	T	Q	T	N	Q	N	I	T	V	T	G	Y	P	G	D	K	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T	T	B		T	T												S	S	S	S											T	T	S			T	T	T	S	S									T	T			T	T										T	T	S	S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	M	W	E	S	K	G	K	I	T	Y	L	K	G	E	A	M	Q	Y	D	L	S	T	T	G	G	N	S	G	S	P	V	F	N	E	K	N	E	V	I	G	I	H	W	G	G	V	P	N	E	F	N	G	A	V	F	I	N	E	N	V	R	N	F	L	K	Q	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T					S					T	T		T	T						T	T	S											T	T	T
	.	.	.	.	.	.
Sequence	E	D	I	N	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T