Email l.a.kelley@imperial.ac.uk Description P75737 Date Thu Jan 5 12:13:36 GMT 2012 Unique Job ID 40c12eecaa3f5d6e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1jiwi_ 54.9 25 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 2 c3ko7E_ 51.6 15 PDB header:hydrolase Chain: E: PDB Molecule:d-tyrosyl-trna(tyr) deacylase; PDBTitle: dtd from plasmodium falciparum in complex with d-lysine 3 d2f2ab2 38.0 21 Fold:Glutamine synthetase/guanido kinase Superfamily:Glutamine synthetase/guanido kinase Family:GatB/GatE catalytic domain-like 4 c3h0mE_ 36.8 32 PDB header:ligase Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus 5 c2g5iB_ 36.3 21 PDB header:ligase Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4 6 d1j7ga_ 31.3 29 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 7 c3al0B_ 27.5 29 PDB header:ligase/rna Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b; PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state. 8 c2xuvB_ 27.5 33 PDB header:unknown function Chain: B: PDB Molecule:hdeb; PDBTitle: the structure of hdeb 9 c2xi1A_ 23.5 42 PDB header:viral protein Chain: A: PDB Molecule:nef; PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample 10 c3rbbA_ 21.1 23 PDB header:viral protein, protein binding Chain: A: PDB Molecule:protein nef; PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain 11 d2nefa_ 20.5 38 Fold:Regulatory factor Nef Superfamily:Regulatory factor Nef Family:Regulatory factor Nef 12 d1jkea_ 16.3 29 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 13 c2okvC_ 13.8 43 PDB header:hydrolase Chain: C: PDB Molecule:probable d-tyrosyl-trna(tyr) deacylase 1; PDBTitle: c-myc dna unwinding element binding protein 14 c2dboA_ 13.7 57 PDB header:hydrolase Chain: A: PDB Molecule:d-tyrosyl-trna(tyr) deacylase; PDBTitle: crystal structure of d-tyr-trna(tyr) deacylase from aquifex aeolicus 15 d1f3va_ 13.2 39 Fold:Ferredoxin-like Superfamily:TRADD, N-terminal domain Family:TRADD, N-terminal domain 16 d2pifa1 12.1 32 Fold:PSTPO5379-like Superfamily:PSTPO5379-like Family:PSTPO5379-like 17 c2yrcA_ 11.4 31 PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: solution structure of the zf-sec23_sec24 from human sec23a 18 d1w0na_ 10.5 41 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 36 carbohydrate binding module, CBM36 19 c3nymA_ 9.4 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of functionally unknown protein from neisseria2 meningitidis mc58 20 c1yodB_ 8.7 77 PDB header:de novo protein Chain: B: PDB Molecule:water-solublized phospholamban; PDBTitle: crystal structure of a water soluble analog of phospholamban 21 d1tc5a_ not modelled 8.6 22 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 22 c3ho6B_ not modelled 8.6 16 PDB header:toxin Chain: B: PDB Molecule:toxin a; PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a 23 c2p22D_ not modelled 8.1 38 PDB header:transport protein Chain: D: PDB Molecule:hypothetical 12.0 kda protein in ade3-ser2 PDBTitle: structure of the yeast escrt-i heterotetramer core 24 d1zxqa2 not modelled 7.9 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 25 d1efnb_ not modelled 7.9 32 Fold:Regulatory factor Nef Superfamily:Regulatory factor Nef Family:Regulatory factor Nef 26 c1yodA_ not modelled 7.8 77 PDB header:de novo protein Chain: A: PDB Molecule:water-solublized phospholamban; PDBTitle: crystal structure of a water soluble analog of phospholamban 27 c3ik5A_ not modelled 6.8 37 PDB header:viral protein/signaling protein Chain: A: PDB Molecule:protein nef; PDBTitle: sivmac239 nef in complex with tcr zeta itam 1 polypeptide2 (a63-r80) 28 d2qtva5 not modelled 6.6 16 Fold:Rubredoxin-like Superfamily:Zn-finger domain of Sec23/24 Family:Zn-finger domain of Sec23/24 29 d1a8oa_ not modelled 6.5 43 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 30 d1ny722 not modelled 6.4 29 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 31 d1smpi_ not modelled 6.3 19 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 32 c2bfuL_ not modelled 6.2 29 PDB header:virus Chain: L: PDB Molecule:cowpea mosaic virus, large (l) subunit; PDBTitle: x-ray structure of cpmv top component 33 d1pgl22 not modelled 6.2 35 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 34 d2ysca1 not modelled 6.1 83 Fold:WW domain-like Superfamily:WW domain Family:WW domain 35 d1jmxa5 not modelled 5.9 33 Fold:Streptavidin-like Superfamily:Quinohemoprotein amine dehydrogenase A chain, domain 3 Family:Quinohemoprotein amine dehydrogenase A chain, domain 3 36 d2oa4a1 not modelled 5.8 60 Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:SPO1678-like 37 c2opkC_ not modelled 5.5 56 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 38 c3r47I_ not modelled 5.4 100 PDB header:de novo protein Chain: I: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24 39 c3r47J_ not modelled 5.4 100 PDB header:de novo protein Chain: J: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24 40 c3r47B_ not modelled 5.4 100 PDB header:de novo protein Chain: B: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24 41 c3fzyA_ not modelled 5.3 50 PDB header:toxin Chain: A: PDB Molecule:rtx toxin rtxa; PDBTitle: crystal structure of pre-cleavage form of cysteine protease domain2 from vibrio cholerae rtxa toxin 42 c3eebB_ not modelled 5.2 50 PDB header:toxin Chain: B: PDB Molecule:rtx toxin rtxa; PDBTitle: structure of the v. cholerae rtx cysteine protease domain 43 c2re3A_ not modelled 5.2 58 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf1285 family protein (spo_0140) from2 silicibacter pomeroyi dss-3 at 2.50 a resolution 44 c1bmv2_ not modelled 5.1 35 PDB header:virus/rna Chain: 2: PDB Molecule:protein (icosahedral virus - b and c domain); PDBTitle: protein-rna interactions in an icosahedral virus at 3.02 angstroms resolution 45 c2xxzA_ not modelled 5.1 28 PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 6b; PDBTitle: crystal structure of the human jmjd3 jumonji domain 46 c3r47L_ not modelled 5.1 100 PDB header:de novo protein Chain: L: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24 47 c3r47M_ not modelled 5.1 100 PDB header:de novo protein Chain: M: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24 48 c3r47F_ not modelled 5.1 100 PDB header:de novo protein Chain: F: PDB Molecule:coiled coil helix l24h; PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24